YALI0E14839g

Overview

Description weakly similar to uniprot|G3AHD3 Spathaspora passalidarum hypothetical protein SPAPADRAFT_49170
Locus type CDS
Locus tag YALI0E14839g

Location

Species Yarrowia lipolytica Positions 1770151..1771845
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1695 (nuc.)
Previous locus YALI0E14817g Next locus YALI0E14850r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14839g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14839gYALI0E14839g_mRNA-001YALI0E14839g_CDS-001

Nucleotide sequence

 

>YALI0E14839g
ATGCAATGGTTTAAGCGAAGCAAGCAGGCGTTGAGCGCCGATGAGCTCCTTTCGCAACTA
CAGGACGACCAGCAACTCACCTTTGCGCAGTTCGCCGTGATTGTGAAGCCCTTCTCAGCT
CGAGACGCCCATGAGTGCACCATGGCATTCCGAATTCTGCACACCATTAACGCCAATCTC
AAAGAAACACAAAGCTGGCCGTTCCAGTTGCTGCGACATTGCGACCTGGAACATGTCACG
GGGAAGTCTTCGTGGCTCGATCGAATCCGAAAACGACCACAAAAGCCCACCTCCGAGGGA
GGCACCAAAACAGCATTCAACATCAACATTGCCAACAAGGTCCACAAGCAGTGCGGCCAA
ATGAAGACCCAGATGCAGCAATGGGACATTAAACACCTCCAGAATGTTACAGGCAAGCTT
CTTACCAACGGAAGCTTTACCTCGGACGCCTCTTCGGTACTCATCACACTTGTGCTCAGA
ATCCTTTCACGATACTCGGAACTGGAGGAACAGCTGGATCTGGCAATGTCACGTGCCACC
CTCATTAAGATCAACTACGAGCTCACAGAGAAGCTCAGCAAGGAGCTCGAGAACCAGGGA
GAAGAGGAGGACGAAATAAACCCTCTGCTTGTGGCCTACAGATCGTTCGTCAAGCAACTG
CTCTCCGAGCTGGACACTGATAGCGACAACAGACAAGATCTGCTGCAGGTTGTCAAGGAC
CTCGAGGACATGTACAAGCAGTACGCCGCCTCCACTCCCAAAAAATCCTCTCCTCGAAAG
AAGTCCTCTACTTCGAGATTCCCCACTCCTTCAACTCCCAAGCGAGAGGCCTCGGACCCC
TTCGATTACATGGACTCTCCCACTCACACACAGACGGAATCTTTCTCGTCTATGAGCAAC
TCGGTTAACTCCCTATTCTCTTCTACATCGAAAGCATCCTCCACTGTCAGTGACGAGCTT
CCTAACCTCCTGCATGCATTTGACATGGAATACGTGAAGCAGCAGCGACAGCGACGAGAG
CTGGACGGCGTTGGAATGTCGTCCCCACAGTCCATGACCTCTTCCATCTCCTCCAAGTCG
CTCTCTTCTTCCAAGTCATTCTCCAAGCTCAACCCCACACACTCTTCACCTCTGGTGGCG
GCATCTCCTCTTCAGACTTCGCATATTGCCCCAATGCCCAATTCTTCACCTGCACCCTCG
CATCTTGACGTCCAGATGATCAACAACCGAATGATGGTCAAAACCGCTTCTGGTTACCAG
GACATGCAGGAGTGGGTCATGAAGCAGAACCAGGAGGCTGCTCTTCGAACCACACAGCCC
GCCGTGAAGAGCGCTTCGGACTACATTGTCACGGTTCCCAAGGAATCTGTTCCTCGAACC
CTTCCTTCTACAGGCACTTCTTTCCTCTCCAACATCTTCGGAAACCGGCCTCTGGCTCCC
CCCGTTCCTCTTGAAAAGAAGGAACTGCCTAAGCCCCAGCCTTCCGTCGGCCCTACTACC
TCTCTCCTAGCCAAGAGTCTTTCTGAGAAGCACTCTACCTTCCAGCAATCTGCATTTGAG
ACCTCTTACCGACAGGAGATGAACGATTTTGAGTAGAGCGTCGACCAAACTACGATACTA
CAAGTAGCTCGTGCATAGCATTATTTATTTCCGTGTGTAATACGATAAACAATACAAACA
AAACACCATACAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14839g_CDS-001

Protein length: 532 aa.
Product: Conserved hypothetical protein

>YALI0E14839g_CDS-001 MQWFKRSKQALSADELLSQLQDDQQLTFAQFAVIVKPFSARDAHECTMAFRILHTINANL
KETQSWPFQLLRHCDLEHVTGKSSWLDRIRKRPQKPTSEGGTKTAFNINIANKVHKQCGQ
MKTQMQQWDIKHLQNVTGKLLTNGSFTSDASSVLITLVLRILSRYSELEEQLDLAMSRAT
LIKINYELTEKLSKELENQGEEEDEINPLLVAYRSFVKQLLSELDTDSDNRQDLLQVVKD
LEDMYKQYAASTPKKSSPRKKSSTSRFPTPSTPKREASDPFDYMDSPTHTQTESFSSMSN
SVNSLFSSTSKASSTVSDELPNLLHAFDMEYVKQQRQRRELDGVGMSSPQSMTSSISSKS
LSSSKSFSKLNPTHSSPLVAASPLQTSHIAPMPNSSPAPSHLDVQMINNRMMVKTASGYQ
DMQEWVMKQNQEAALRTTQPAVKSASDYIVTVPKESVPRTLPSTGTSFLSNIFGNRPLAP
PVPLEKKELPKPQPSVGPTTSLLAKSLSEKHSTFQQSAFETSYRQEMNDFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG