YALI0E14465g

Overview

Description similar to uniprot|P25443 Saccharomyces cerevisiae YGL123w SUP44 40S small subunit ribosomal protein
Locus type CDS
Locus tag YALI0E14465g

Location

Species Yarrowia lipolytica Positions 1732993..1733846
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 854 (nuc.)
Previous locus YALI0E14443g Next locus YALI0E14487g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14465g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14465gYALI0E14465g_mRNA-001YALI0E14465g_CDS-001

Nucleotide sequence

 

>YALI0E14465g
ATGTCTACTGAAGCAGCTGCTCCCCGAGGTGGATTTGGCCGTGGTCGAGGTGACCGTGGC
GGACGAGGCCGTGGCCGAGGTGGCCGAGGCCGAGGCCGAAAGGACGAGGAGAAGGGATGG
GTTCCCGTCACCAAGCTTGGTCGACTTGTCAAGGCCGGTCACATCAAGTCCATGGAGGAG
ATCTACCTGCACGCTCTCCCCATCAAGGAGTACCAGATTGTTGACCAGCTCCTGCCCGTT
CTCGAGGATGAGGTCATGAAGATCAAGCCCGTCCAGAAGCAGACCCGAGCCGGTCAGCGA
ACCCGATTCAAGGCTGTCGTTGTCATTGGTGACTCCAACGGTCACGTCGGTCTCGGTATC
AAGACCGCCAAGGAGGTTGCCACCGCCATCCGAGCCGCCATCATCATTGCCAAGCTCGCC
ATCATCCCCGTCCGACGAGGATACTGGGGTTCTTCTCTTGGTGAGCCTCACACCGTCCCC
ACCAAGACCTCCGGAAAGTGTGGATCCGTCAACGTTCGACTCATCCCCGCCCCCCGAGGT
TCTTCCATTGTTGCCTCCCCTGCTGTCAAGAAGCTTCTGCAGCTCGGTGGTATCAAGGAT
GTCTACACCTCTTCTGCCGGTTCCACCCGAACCCTGGAGAACACCCTCAAGGCTACCTTC
ATTGCTATTGCCAACACCTACGGCTTCCTGACCCCCAACCTGTGGACCGAGACTGCCCTC
ACCCCCTCTCCCCTCGAGACCCACTCTTCTTTCCTCTCTTCCCAGAAGCGACGATTCTAA
GTGTAGTTTAGAGTAAAAATTGCGTATCCTATCGAGTGAACTTTGCATAGTAAAGTGAAC
GGACCTGTAGACCG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E14465g_CDS-001

Protein length: 260 aa.
Product: Ribosomal 40S subunit protein S2, putative

>YALI0E14465g_CDS-001 MSTEAAAPRGGFGRGRGDRGGRGRGRGGRGRGRKDEEKGWVPVTKLGRLVKAGHIKSMEE
IYLHALPIKEYQIVDQLLPVLEDEVMKIKPVQKQTRAGQRTRFKAVVVIGDSNGHVGLGI
KTAKEVATAIRAAIIIAKLAIIPVRRGYWGSSLGEPHTVPTKTSGKCGSVNVRLIPAPRG
SSIVASPAVKKLLQLGGIKDVYTSSAGSTRTLENTLKATFIAIANTYGFLTPNLWTETAL
TPSPLETHSSFLSSQKRRF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG