YALI0E14344g

Overview

Description weakly similar to uniprot|Q8BJ94 Mus musculus UV radiation resistance-associated UvrG protein
Locus type CDS
Locus tag YALI0E14344g

Location

Species Yarrowia lipolytica Positions 1718302..1719957
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1656 (nuc.)
Previous locus YALI0E14322g Next locus YALI0E14366g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14344g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14344gYALI0E14344g_mRNA-001YALI0E14344g_CDS-001

Nucleotide sequence

 

>YALI0E14344g
ATGGGACATAGAGACAGACACAAACTGACTCTAGCGTCGTCCAAGCGCCGGCTTCGCCAC
GTCCATCGCCTTTCCTTCGCCAATGTGGTTTGTGTGCGCGGCAAAAACGACCTCAAAAGC
ATCTCTTCGGCGCTCGCCACGCCCCTGGACACCCCTCCGACCCGGCCAGCGTCGCCCTTC
ATCACTAACCACGACTCTCAATTCCGCGTTTCTCAAAAAGGCTTTTTGCCGTTTGTGACT
GCCAAAAAGGCCACGTCGACCAATGTTTCCATCACAACCAAGGGCGAGTCAGAGCCCGAA
AACGGAGTTCATGACGAGACTACGGAGCCTAAAACGAACGGCAAAGAACTCATGCCGGCC
CCAACTATCACCAGCGTCACGGAGTGTCCCGCGCCAACTCCCGAAGTCGAGATTTCTCGG
GGACCCAGCACAGACTCACTGAACGACGAACTCATGGAATACCACCCACCCACCGCATTC
TTCTCAATCCACGACCCAGAACATAAAGACGAGCCCATCTACGTATCGTCCTTGTTTGTG
CACGAGTCGAACTTTGGCGCGGACCTGGACTTTGACAAAAACTACAGAGATTTAAAGGAG
ATCGTGGTGGTTCTGTGGCTCGAGGACAGCGACGACGCAGAGCTGTTCCGGCCCTCGGTA
TATCGAGTCGATTTGTCGTCTTTACGATACATTGGCCAGGATGAATCAACAGCCCGTCGG
CAGAGCCAACTAGTCCTGTCCCTTGACGACGGTTGTTTCACTCCGGGAACTCCCTCGGCC
TTTCTACACCAGGTGTCTTCTTCGTCTGGGTTACGCACACCCGCAGAGCCCTTGAATGCC
ACGTCATTTGACCAGATGCTCAAGGTGCTCAATATGGAACATCTTGTGAAGGACGCCGAA
CACACCCGACAGACAATCTCGAAGGAGGTAGAAACTCTGACGCGGAATCGGGAGCTGATG
ACCATGGCTGAACGTAGTCAGAACTACACCACTGCTGAAATAGCCCGGATAAAGGAAGCC
CAGGCAGAATTGGCCACCACGAAGTTCAAGTTGGACCAAAAAAGGGCAAAGCTCGTGCAG
GACATAGAAACGAGGCGTGCGTACTTGAGGAGCGGGGAAATGCTGCAAGATAAGGCTAGG
GAGGCGCTACAGGATGTACCTACGGATCTGCACAAGCAAGTTCAGGACGAAAAGCGAGCT
CTTTTCGATATCAGGAAACAGGCTCTTCAACAACTTTGTGAAATCTTTCCTATCACTCAT
AGGAATGGCTCGTACGCAATTGCCGGCCTATCACTAACCTCCCCCGACGAACACGAGCAG
ACATTTGCATATTCTCTTACTTGCGAGCTTCTGATGCTCCTTTCTGGGTTGTTTGAGATT
CCGCTGAAGTATCCCATCACACGTGTGGGCGCTCATCATGCCATCTTTGACCCGGTGAGC
GTGATCACCGGATCGCGTGCGTTCCCTCTGTTCCCCTCGTCGTTACAGTATCGTTTCGAG
TATGCCGTGTTGCTGCTCAACAAGGACATCCAGATGATTTTGGAGCTGCTTAAAATACCC
ATTGCAGATGGACGGGAGACTTTGGGTATGTTGGCCATTCTTTTGGCCGTCAACATGTAG
TGTATTGTAGGTATTATTTATTTCGTTATGATTATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14344g_CDS-001

Protein length: 540 aa.
Product: Conserved hypothetical protein

>YALI0E14344g_CDS-001 MGHRDRHKLTLASSKRRLRHVHRLSFANVVCVRGKNDLKSISSALATPLDTPPTRPASPF
ITNHDSQFRVSQKGFLPFVTAKKATSTNVSITTKGESEPENGVHDETTEPKTNGKELMPA
PTITSVTECPAPTPEVEISRGPSTDSLNDELMEYHPPTAFFSIHDPEHKDEPIYVSSLFV
HESNFGADLDFDKNYRDLKEIVVVLWLEDSDDAELFRPSVYRVDLSSLRYIGQDESTARR
QSQLVLSLDDGCFTPGTPSAFLHQVSSSSGLRTPAEPLNATSFDQMLKVLNMEHLVKDAE
HTRQTISKEVETLTRNRELMTMAERSQNYTTAEIARIKEAQAELATTKFKLDQKRAKLVQ
DIETRRAYLRSGEMLQDKAREALQDVPTDLHKQVQDEKRALFDIRKQALQQLCEIFPITH
RNGSYAIAGLSLTSPDEHEQTFAYSLTCELLMLLSGLFEIPLKYPITRVGAHHAIFDPVS
VITGSRAFPLFPSSLQYRFEYAVLLLNKDIQMILELLKIPIADGRETLGMLAILLAVNM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG