YALI0E13948g

Overview

Description some similarities with uniprot|P10961 Saccharomyces cerevisiae YGL073w HSF1 heat shock transcription factor
Locus type CDS
Locus tag YALI0E13948g

Location

Species Yarrowia lipolytica Positions 1679667..1681667
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2001 (nuc.)
Previous locus YALI0E13926g Next locus YALI0E13970g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13948g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13948gYALI0E13948g_mRNA-001YALI0E13948g_CDS-001

Nucleotide sequence

 

>YALI0E13948g
ATGTCCAACACTCTGGTCAAAAAGGGCCAGGGCCAGGCGGCATCCAACGCCAAAAAAATC
GGCTACAACAAAAAGAAGGGCGGCGGCCAGACCAAGGGCCGGCCTGCGTTTGTGTTCAAG
CTGTGGAACATGGTCAACGACCCTGCCTACGACGAGTACATCCGGTGGATGCCTGACGGC
AAGTCGTTCCAGATCACGGGCCGAGAGCAGCTGGAGAAAATTGTGCTGCCGCGGTTCTTC
AAACATAACAACTTCTCGTCGTTTGTGCGGCAGCTCAACATGTACGGGTGGCACAAGGTC
CAGGACGTGACCAGTGGCAGCATGCAATCCAACGACGAGGTGTGGCAGTTCAAGAGCCCC
AACTTCATCCGCGGCCGCGAAGACCTGCTCGACAACATTGTGCGAAACAAGGGAACCAAG
GGCAGCGACGAGGAGGAGGAAATGGACATGACCACACTGATGGACGAGCTGCAACAGATC
AAGCTCAACCAGCTTAACCTGACCCAGGAGGTCAACAAGCTCCGCACAGACAACCAGCTC
CTGTGGCAAGAGAACCTGGGCTTCAAGGACAAGCACAAGCAGCATGGCGAGACGCTGGAG
CGAATTATGCGCTTCCTGGCCTCTCTGTACGGCAACCAGGGCAAGGTGCTTGGAGAAGCC
ATCTCTGGCAACAGAAACCAGCGTCTGCTTCTGGGCAACACTGATCCCGCCCAGGCTACA
CATATGATCAATGAGGCGGCTGCAGCTGCTGCCGCAGAGAACAGCGGCAACTTCCCCTTT
GAGATGAACGACATGTTCAACAACAACAACAACAACAACAACAACAGCAATAACCCCAAC
GACAGCCCCTCGTTTGCACGAGTCCAGCCGCTGTCCTCTACCAACTCACCGCAGACGGTA
ACAGGATCTCCCCGGGAAGAAAACAACAAAACAAACAACACAAACAACACAAGCAACAAT
TACGACAAGATTACGGCATACGACACCGACACGGGATCGGAGCTTCCCGACAACCTGCAG
GACCTCACTGACCTGTCGGACTTCACACCCTCCATGCTGGACCCCCAGACTGTGCAGCAG
TCCATGGAGCCTCCCATGGGTTTCGGGGACCTCAACAAGAATTCCTCGTTGATACTCTCT
AACAACTCCAACAACTCCATCAACATGCCCCAGACGCCAATGCGAAACAACTCCACTAGC
TCCCATAGCTCGCAGAACATGTCGCACCACAACTACAACTACCAGCCCAGCACGCCCGGC
GCGTTATTCCCTGAGCTAGAGGCGTTCCAGGGCGCCAACGACCAGCTGATCCGGTCGGCC
GAGCGTCCCCGAAACAACCTCAACATCAACGGCAACGGCAAGGCCGACGATCTGCAGCGA
CAGCTTCAGGATCATGGCCGTCACATTGACCAGTTCACTGACCGGCTCAAGAAGCAGCAG
GGATACCAGCCGCAGCAGTTGCAGCACCAGCAACAACCGCAGCAGCCTCAGCAGCAGCCC
ACCCCGATGCAGGCACCTGCTCCCACGCCGGCATCCACAATCAGCTCTGCACCTACCCCT
GATCCTACTTCTGACCTGTTCAACGTGGGCGACCCCAACATTGTGCCCATGCAGGATTTC
AACATGGACGACTACATTGATAACGAGGCGGACATGTTTGACCCTGAAGTCAAGATTGAG
GAAGACATGCCTCTGGTGACAGAGTTGGATTCGCCTGCGCCTCGGCCTAAGAAGCGTAAG
GCTGGAGAGTAGGAGGAGAAAGAAATGCAAGGAAAGTTGACGAGGAAAGTTGGTGGAATA
ACTCTGATGAAGAAGAGTCCACAACGAAGAAAACGGTCTCAGCGGAGTATGAGTATCATA
GGTAATTTATTGCGTAATAACCATAGCTATATTGCAGTACATGGTGAGTTGGGGGAGCAA
AATTCATAATACAGAGCAATGGTTGTCTATGATGCGATGATCGCAGATCGAAATAGAAAA
ATACATGATCTCAAGCAGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13948g_CDS-001

Protein length: 584 aa.
Product: Conserved hypothetical protein

>YALI0E13948g_CDS-001 MSNTLVKKGQGQAASNAKKIGYNKKKGGGQTKGRPAFVFKLWNMVNDPAYDEYIRWMPDG
KSFQITGREQLEKIVLPRFFKHNNFSSFVRQLNMYGWHKVQDVTSGSMQSNDEVWQFKSP
NFIRGREDLLDNIVRNKGTKGSDEEEEMDMTTLMDELQQIKLNQLNLTQEVNKLRTDNQL
LWQENLGFKDKHKQHGETLERIMRFLASLYGNQGKVLGEAISGNRNQRLLLGNTDPAQAT
HMINEAAAAAAAENSGNFPFEMNDMFNNNNNNNNNSNNPNDSPSFARVQPLSSTNSPQTV
TGSPREENNKTNNTNNTSNNYDKITAYDTDTGSELPDNLQDLTDLSDFTPSMLDPQTVQQ
SMEPPMGFGDLNKNSSLILSNNSNNSINMPQTPMRNNSTSSHSSQNMSHHNYNYQPSTPG
ALFPELEAFQGANDQLIRSAERPRNNLNINGNGKADDLQRQLQDHGRHIDQFTDRLKKQQ
GYQPQQLQHQQQPQQPQQQPTPMQAPAPTPASTISSAPTPDPTSDLFNVGDPNIVPMQDF
NMDDYIDNEADMFDPEVKIEEDMPLVTELDSPAPRPKKRKAGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG