YALI0E13552g

Overview

Description weakly similar to uniprot|E9E2U8 Metarhizium acridum MYND finger family protein
Locus type CDS
Locus tag YALI0E13552g

Location

Species Yarrowia lipolytica Positions 1636129..1638042
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1914 (nuc.)
Previous locus YALI0E13530g Next locus YALI0E13574g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13552g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13552gYALI0E13552g_mRNA-001YALI0E13552g_CDS-001

Nucleotide sequence

 

>YALI0E13552g
ATGGCACCTCTAAAAATCTTCAAGGCTGGGGAAGGACCCGCCAAACGAGGGCTTGTGTCG
TGCTCTTATTACTCCACAGGAGATGTCATTTGCTCGTTTGAACCTGCCGTCAACGTCCCT
CTCTCCGGACGACTTCTGGTAGGTGGAGACGCAGACGGAACTATCGAGGTGGAGCAGGAG
GCACGTCTCGACCCCACTACAGGCGTTTGTGCCTTTTGTCTTGAAACATACCCCGCCAGA
AACATCACCATTTGTCAGGACTGCAAGCTCATGTCCTATTGCTCGCAGAGGTGTCTCGAA
GCGGACACCTTGCATTCTCCCGAATGTACAGATCTCTGTGGGCCCCAAAAACTGATCATG
TCCGGATTCCTACGTGCTCTGTACCGGATTTTATGCATGGCAGAGCAGCCCCGTCCTCGC
AACACTTACGCCCAGCTCACCCACCACACCACCGATACCTCCTGGCCTGCCATGGATACC
CTTCGAATGGCAGCTGAAGCTCTGGTCTCCAGAAACGCCTCTCGCGGTCACCCGCTTGAA
CAGATTCTTGAGTACGCAGGTATGCTCTTCGTCAACCAATACACTCGATGTGACGATCTA
GGGCGACAGGGAGGGTACATCTTCGATCCTACTCTTGCTCTGATCAACCACAGCTGTGTT
CCCAACGCGTACTTGCTCTTTAGAGGCAGAAAGGTACATCTCGTGTGCTGGAAACCTATT
AACGACGGCGACGAAGTGTTCCTATCGTACACCCGGTTCATGCACCCTACCCCGGAACGG
CGTACTCTGTTGTATATGCATTTCCGCTTCTGGTGCGAGTGCCCAGGTTGTGTGTCGCAG
GAGCTGGAGTACCCTTACAGTCACGTCGTGTGCACCCAGTGCGGGACTGGAGTCAACAGA
GATCCGTTCACATTGCTGAATCCTCCTACTTTGGATCAATGTCTCAGGCACCTGATGGAT
GGTGTCACCGAGGCCATTTCTGTGCGGAACTCCGTCGATCTCTTGCCTTCGGCACGTTTG
CTTGTCTGCGAATGTGAGAACAAGGTGTCTGGAGACGTCATCCAGGCCATGTTGACATTG
ATGACCCATTCGGTGGAGTATTTTGATAACGCCAACTTCAAAAAGGTCCTGGGCATGGTT
CTTGCTCACGTTTGCACTCTTGAGGGTAATGCTAAGACGGAAAAGTGTCTGACAGTTGTC
GAAGAAGTGACCCAATCCAAGTTGCTTACCATGCAACTATGTCTTCGATTGATGGTTCAG
GCACAAGTTCTACCTATTGATTCTCATATCATGACCTTTTTGGTGACGCTGAGAAACCTA
CATCAACTTCAAGACGAAGCAGAGATCCCCGATTGGGAGCGACTGCCTCACTTGAAGTCC
ACCATTGCCGTAGCACTATTGGAGGCGTTGGTGGAGTTGCGGTACTGCAGAGTTCAGATG
TCGTCATACAACCCCGTTGTTTCCATCAGCCTTTTTATGCTCGGCAACTACCTGCGAATT
CTTGCCGGTGATATTGCTGAGTCCAGGGAGAACGACTTCCTTTCGGACGACGATTTGGAG
TCCATTGTGAATCTCGCCTACGCCTTTTTTTCGTCTGCTCACGAGAATCTCAGCTTCACA
CATCCTGCAAGCCCCTACGTTGAGCAGACCATGATCTGTGGCGATCTTGTGAGAAAGGAC
CATGACAATTTGGAGCTTGACGCGAATCTCGTGGTCAGTAAGCATGGTCTTGACCACGAC
ATGTCTGTTCTGTGCGGCTTCCTCTACGAATATCTTGCTCATGACGGGCTTCTTGCTGAC
GGATCTTTCCCCCAGTCCATCCATATTTTGGATGTGAGTCCTGAGGTGGAAATGATCAAG
GGCAAACTGGAGTTTTGGTACCGCCCCATGTCTTCTCCTCCTGTTACTGTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13552g_CDS-001

Protein length: 638 aa.
Product: Conserved hypothetical protein

>YALI0E13552g_CDS-001 MAPLKIFKAGEGPAKRGLVSCSYYSTGDVICSFEPAVNVPLSGRLLVGGDADGTIEVEQE
ARLDPTTGVCAFCLETYPARNITICQDCKLMSYCSQRCLEADTLHSPECTDLCGPQKLIM
SGFLRALYRILCMAEQPRPRNTYAQLTHHTTDTSWPAMDTLRMAAEALVSRNASRGHPLE
QILEYAGMLFVNQYTRCDDLGRQGGYIFDPTLALINHSCVPNAYLLFRGRKVHLVCWKPI
NDGDEVFLSYTRFMHPTPERRTLLYMHFRFWCECPGCVSQELEYPYSHVVCTQCGTGVNR
DPFTLLNPPTLDQCLRHLMDGVTEAISVRNSVDLLPSARLLVCECENKVSGDVIQAMLTL
MTHSVEYFDNANFKKVLGMVLAHVCTLEGNAKTEKCLTVVEEVTQSKLLTMQLCLRLMVQ
AQVLPIDSHIMTFLVTLRNLHQLQDEAEIPDWERLPHLKSTIAVALLEALVELRYCRVQM
SSYNPVVSISLFMLGNYLRILAGDIAESRENDFLSDDDLESIVNLAYAFFSSAHENLSFT
HPASPYVEQTMICGDLVRKDHDNLELDANLVVSKHGLDHDMSVLCGFLYEYLAHDGLLAD
GSFPQSIHILDVSPEVEMIKGKLEFWYRPMSSPPVTV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG