YALI0E13123g

Overview

Description similar to uniprot|P07263 Saccharomyces cerevisiae YPR033c HTS1 histidine--tRNA ligase, mitochondrial
Locus type CDS
Locus tag YALI0E13123g

Location

Species Yarrowia lipolytica Positions 1580776..1582453
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1678 (nuc.)
Previous locus YALI0E13101g Next locus YALI0E13145g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13123g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13123gYALI0E13123g_mRNA-001YALI0E13123g_CDS-001

Nucleotide sequence

 

>YALI0E13123g
ATGCTGCGGAGAACCCTCACACAAGTTATTCGAAGAATGTCGTCCGCTGCCAACGTTGAG
GCTGCCGTTGCCGCTCCTACCGCCGCTCCCCAGGCCGCCCCCAAGAAGGAAAAAAAGGCC
GTCAAGTATGAGCTCAAGGTGCCCAAGGGAACCAAAGACTGGGCCGATAAGGACATGGTT
GTTCGAGAGGCCATTTTCGACACTCTGGCCAAGGTGTTCAAGCGACATGGCGCCGTGACC
ATCGACACCCCCGTCTTTGAGCTGCGAGAGATTCTGGCCGGAAAGTACGGCGAGGATTCC
AAGCTAATCTACAACCTGGAGGACCAGGGAGGAGAGCTGACATCGCTGCGATACGATCTG
ACGGTGCCCTTTGCCCGATTTGTGGCCCAGAACGGAATCCAGGCCATCAAGCGATACCAC
ATTGCCAAGGTGTACCGAAGAGATCAGCCCGCCATGACCAAGGGCCGAATGCGAGAGTTC
TACCAGTGCGATTTCGACGTGGCTGGCGTCTACCCCACCATGATCCCCGATGCCGAGTGT
CTGGCCATTGCCGTGGAGGGTCTGACGTCACTCGGAATCACCAACTTCACCATCAAGCTC
AACCACCGAAAGATTCTCGACGGAATCTTCCAGGTCTGCGGAGTCAAGGAGGAGGACGTG
CGAAAGGTGTCTTCTGCCGTCGACAAGCTCGACAAGGCACCCTGGGCCGACGTCAAGAAG
GAAATGTGCGTGGAGAAGGGCCAGCCTGAGGAGGTCGCCGACAAGATTGGCGAGTACGTG
CAGCACAAGGGCTCTGTCAAGGACATGCTCGAGTGGCTGGAGGGAGACGCTGCCCTTATG
GCCAACGAGTCTGCCAAGACTGGTATCGAGGAGATGCGAACTGCCCTGCCCTTCATGGAG
TCCTTTGGTATCACAAACTACCTGTCTTTCGACATGTCTCTGGCCCGAGGTCTTGATTAC
TACACCGGAATCATCTACGAGGCTGTGACCGAGGCCTCTGCTCCCCCCACCGAAGAACAG
AAGGCTGCCCTCAAGGCTGCTGCTGAGAAGGATGGCAAGAAGAAGAAGAAGTCCAAGGAT
GACGACGACAACTCCGAGAACGTCGGTGTTGGCTCCATTCTGGCCGGAGGACGATACGAT
AACCTGGTCGGCATGTTTGCCAACAACTCCAAAAAGGGTAACATCCCCTGTGTTGGAGTC
TCCTTTGGCGTCGAGCGTCTTTTCTCGCTCATCAAGTCCCGGCCCGGACTCATGGAGAAG
GTCCGACCTGCTGCTACCCAAGTCTACGTCATGTCCATGGGAGGAGGACCCGAGTACACG
GGATTCCTCGCCGAGCGAATGGCCGTCACCCACAAGCTGTGGGAGGCCGGAATCGAGGCC
GAGTACATGTACAAAACCAAGCCCAAGTACCCCCAGCAGTTCACCGCCGCCGAGAAGGCC
GGATGTCCCTTTGCCGTCATTCTGGGCCAGGACGAGTATCCCCAGGGTCTGGTCAAGATC
AAGGAGCTGGGTCTGGGTGAGGAATCTGACCGAGGAACTGATGTCAAGATTGAGGATCTG
GCCCAGATTCTCAAGGAGAAGATTGCCAACAAGACCTCTTCTGTTGGTGAGGTCCAGAAG
CTTCTCAAGGACTTTACCTTGTAAGTGTAAATATGAATAAAAGTTATGACTATGATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13123g_CDS-001

Protein length: 548 aa.
Product: Cytoplasmic and mitochondrial histidine tRNA synthetase, putative

>YALI0E13123g_CDS-001 MLRRTLTQVIRRMSSAANVEAAVAAPTAAPQAAPKKEKKAVKYELKVPKGTKDWADKDMV
VREAIFDTLAKVFKRHGAVTIDTPVFELREILAGKYGEDSKLIYNLEDQGGELTSLRYDL
TVPFARFVAQNGIQAIKRYHIAKVYRRDQPAMTKGRMREFYQCDFDVAGVYPTMIPDAEC
LAIAVEGLTSLGITNFTIKLNHRKILDGIFQVCGVKEEDVRKVSSAVDKLDKAPWADVKK
EMCVEKGQPEEVADKIGEYVQHKGSVKDMLEWLEGDAALMANESAKTGIEEMRTALPFME
SFGITNYLSFDMSLARGLDYYTGIIYEAVTEASAPPTEEQKAALKAAAEKDGKKKKKSKD
DDDNSENVGVGSILAGGRYDNLVGMFANNSKKGNIPCVGVSFGVERLFSLIKSRPGLMEK
VRPAATQVYVMSMGGGPEYTGFLAERMAVTHKLWEAGIEAEYMYKTKPKYPQQFTAAEKA
GCPFAVILGQDEYPQGLVKIKELGLGEESDRGTDVKIEDLAQILKEKIANKTSSVGEVQK
LLKDFTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG