YALI0E12045g

Overview

Description similar to uniprot|Q0CJK3 Aspergillus terreus YATEG_06131, protein with WD40/YVTN repeat-like domain
Locus type CDS
Locus tag YALI0E12045g

Location

Species Yarrowia lipolytica Positions 1458962..1461249
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2288 (nuc.)
Previous locus YALI0E12023g Next locus YALI0E12067g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12045g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12045gYALI0E12045g_mRNA-001YALI0E12045g_CDS-001

Nucleotide sequence

 

>YALI0E12045g
ATGTCCTACAACTGTCTGCCTCCAGCAGCCCCCAAAGTTCTGGTGGAGATCTGTGGACCT
GCCCTGGCTGTAGTAGAACCCGACACTGCGACTGTCTATACCCACGACCCCTCCAACCTG
ACCCGAGTGCCCAATGCGGGCTACCAGGTGTCCGACCAGACCAGTATTCGGTTTATGACT
GCCCACAAGACTCAGCTGGCGACTCTCGACACAGCCAACGTGCTTCATCTGGCAGTATTC
GACCTGACCAAAAAGAAGGACCACTTTTGTCAGGTAGCCGAATGGAAGCTGCCGAAATCG
GATATCTTCACCAGCGTGTGCTGGAACCATGATGGAACAGCCCTAGTGCTCAGCACAACT
AACGGAACCCTCTATAGAGTCAACACTCTCACTCATCAGATGGATCCCTTTGGTGCCATG
ATTGGAGGAGCAGTGACCTCGGTTTCGGCAGCTCCCTGCGGCGACAACATCTTTGCAATT
GCTCACAAAAGCGGCTCCATCTCGGTGCTCAGAATTACACACCAACTGGAAGTTTACCAT
ACATTCAAGCTCAGTTCACGAGGCTCCGGTACCGACTTCTCCAAGGACAGCGAGTCCGAA
CCTGCCACAACTCCCGTCTACGCTCTTACAACGGCATGGCACTACTCCTCAAGAGACCCC
TCTAACCAGTCACTTGCCGCCATAGACTCAAACAACAAGATCCAGGTGTGGTCTGTGAGT
CTCAAGTCCATGGTGAGAAAGATTCGGTGCTTTGGACTGCCTGATGGAGCTCACACTGCG
TCTCCCATATGGTGGACAAAGGGCGGATCGCTGTTCCACGCCCTCAATGACTCCCGAGTG
TGCGTCCACAACGTTAAGACATCGAACGTGTCAACCAAAATCATTTCGACCGGGAAAATT
GTGTCTTGCTGTATCAAAAGCAACCGAGGCAAGGCCTGGATGGCAACCACCGGGGGTATC
GAGTTCCTTGACCTTGTAGGAGGAGATAAAAAGATGGAAAACAGAAAGAGAGGAAGCGAT
AGCAGCGAAGGGAGCGTCGAGCAAGTCAAGGAACTCGCTCTTCCTACACCTGAACTGCTA
CCTTCACCTCCCCGACCTCTTCCCAGACGAACGCCCTTGATTCCCATTCCTACAGAAGCT
CCCCCTCCCCCTCCTCCTTCAGCTGGAGCCCAGTCCGACTCTTGGGACGATGAATCTGAT
GGACCCTCCTCAGCATTCTCAAACACCCGCAGCAGCAACACCTCCGCAGATACTCTTCCT
GGCTCCGAATATGATGTGCCAGTGAAACCTCTCCTCAACTGTCGACCAAAGACCCGATTC
TCAGGACAGACCACGCCTACTAGAAACGAAATGCTGCCTATCGACACCTCGCGTATCTCG
CTTTTCCACATTGTCATGTCCGTACCGGACCCAATGGCCGAAAAGGCTCTATCTCCAAGC
TTGTCTTGGGAATCCCAGGCTCTCCGGGTGCTGTTTGACTGGGAGTCGTCTTGCTACGAA
CTTATCCAGAGCCAGCGAACTGAAGACAACACCATCGCCAACTTCTACCTCGGCCAATGG
CTCAACGACAGCGACTATACTCTCAACATTGACTCTCTGGAAAGCACTCTGTCACCCACA
CAATCCACAGCTCTGCTATGTCTGTCTCTACTTGATAGAGAACCCACCAAGGTCGACAAG
GCCATCTCGGTGCACATTTCCCGTGTCCGAAGACGCCTTCCCTCGGCTGCTCTCGATACT
CATTATGTCTGTACCACTCTTCTGTCTCTGGGACTGGCTCACCAGGCGATTCATGTCTAC
CAGCAGCTGGGATTCTACATGGAGGCAGTTATTCTCGGAATTCTCTACGCCCAGAGTATC
GAGGAGACGCTTGATCTGTGGATGTACTCTGCTGCCTCCAGTGACATGTGGCCAGATGGA
GTTGTTCATCGATGCTCCGTTCTCATGTCTCTGGTCAACCCACAGGTGTCCTACCCGGTC
AACTTTGACGACACAGATCTAGGCGGTAATCTCCCCCCTAGCCTCAGAAAGCTGTCTCTA
GATGATCTCCTCAAGTCTTCGCGAGACCAAAATCTGCTTCTTGACTCGCCCATGATCCCC
CATGAGGAGTTCTCGGTCGGCATTGACTCCCCTACCCTCATGCCCATTGACTTTGATTTC
AACAAACCCCCCAACTTCAGCAGACGGGGCCGAACGCCTAAAACTTCGCCCAATCTGATC
TGACCCTTTTATTTATTGCCACTAACGCTTCTGACTTCATCTAGTTTACTATATGAGCAT
TGTCTAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12045g_CDS-001

Protein length: 741 aa.
Product: Conserved hypothetical protein

>YALI0E12045g_CDS-001 MSYNCLPPAAPKVLVEICGPALAVVEPDTATVYTHDPSNLTRVPNAGYQVSDQTSIRFMT
AHKTQLATLDTANVLHLAVFDLTKKKDHFCQVAEWKLPKSDIFTSVCWNHDGTALVLSTT
NGTLYRVNTLTHQMDPFGAMIGGAVTSVSAAPCGDNIFAIAHKSGSISVLRITHQLEVYH
TFKLSSRGSGTDFSKDSESEPATTPVYALTTAWHYSSRDPSNQSLAAIDSNNKIQVWSVS
LKSMVRKIRCFGLPDGAHTASPIWWTKGGSLFHALNDSRVCVHNVKTSNVSTKIISTGKI
VSCCIKSNRGKAWMATTGGIEFLDLVGGDKKMENRKRGSDSSEGSVEQVKELALPTPELL
PSPPRPLPRRTPLIPIPTEAPPPPPPSAGAQSDSWDDESDGPSSAFSNTRSSNTSADTLP
GSEYDVPVKPLLNCRPKTRFSGQTTPTRNEMLPIDTSRISLFHIVMSVPDPMAEKALSPS
LSWESQALRVLFDWESSCYELIQSQRTEDNTIANFYLGQWLNDSDYTLNIDSLESTLSPT
QSTALLCLSLLDREPTKVDKAISVHISRVRRRLPSAALDTHYVCTTLLSLGLAHQAIHVY
QQLGFYMEAVILGILYAQSIEETLDLWMYSAASSDMWPDGVVHRCSVLMSLVNPQVSYPV
NFDDTDLGGNLPPSLRKLSLDDLLKSSRDQNLLLDSPMIPHEEFSVGIDSPTLMPIDFDF
NKPPNFSRRGRTPKTSPNLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG