YALI0E11517g

Overview

Description weakly similar to uniprot|Q8TFK5 Yarrowia lipolytica YALI0E18788g CWP1 Cell wall protein of the PIR family
Locus type CDS
Locus tag YALI0E11517g

Location

Species Yarrowia lipolytica Positions 1409858..1410598
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 741 (nuc.)
Previous locus YALI0E11511r Next locus YALI0E11539g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E11517g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E11517gYALI0E11517g_mRNA-001YALI0E11517g_CDS-001

Nucleotide sequence

 

>YALI0E11517g
ATGAAGTTCTCCGCTGTTCTCCTCGCCTCCGCCGCCGCTCTTGTCTCCGCCAAGAAGTTC
ACCATCGTCGCCATCCGATCTGGCTCCGACATCCAGAACTCCCCCGTCGTCTCCGACGGT
AAGAAGCTCGTCCTTGGCGGTGACGGTGGCATCCCCACCACCTACGAGGTGAAGGATGGT
GTCCTCTACGCCAACGACAAGCCCGTCCAGTTCGGCAACGGCGCCACCATTGAGGATGGC
GAGGGCCAGGGAACCGACGGCGTCACCGTTGACGGTCAGGACCACCTTTACGTCCCCAAC
TACACCTTCACTGCCTGCGCTGCCCAGGGCCGAGCTTACAAGTACACCGTCACCTCCTCC
GAGGACTGCAACCAGGGTGCTACTCCCTTCGCTGCCCGTGTCATCTACCAGGATGAGGAC
TCTAAGACCGAGTCTGCCGCCGCTGCCGGAAACGGTACCGTGGTCACCAAAACCGGTGTT
GTCACTGCCCAGTCCACCGCTCTGGTCACCATCACCTCTTGCGAGGATGACAAGTGCCAC
AAGCCCACCGGTGAGCCTTCCCAGCCCGCCCAGGCTACTGAGCCCACCACCGGCCCTGCC
CAGGCCAACGGTGCCGCTGCTTTCGGTGTCTCCGTTGCCGCTGCCGGTGTTGCCGCCGCT
GCCCTGCTTATCTAAGTTGGTTAGTTGATACTATTATTACCCCCTAATGAATTGAAAAAG
AACTGTAAGCTGTAGTATTTT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E11517g_CDS-001

Protein length: 225 aa.
Product: Cell wall protein, putative

>YALI0E11517g_CDS-001 MKFSAVLLASAAALVSAKKFTIVAIRSGSDIQNSPVVSDGKKLVLGGDGGIPTTYEVKDG
VLYANDKPVQFGNGATIEDGEGQGTDGVTVDGQDHLYVPNYTFTACAAQGRAYKYTVTSS
EDCNQGATPFAARVIYQDEDSKTESAAAAGNGTVVTKTGVVTAQSTALVTITSCEDDKCH
KPTGEPSQPAQATEPTTGPAQANGAAAFGVSVAAAGVAAAALLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG