YALI0D27148g

Overview

Description similar to uniprot|P32468 Saccharomyces cerevisiae YHR107c CDC12 septin
Locus type CDS
Locus tag YALI0D27148g

Location

Species Yarrowia lipolytica Positions 3610523..3612043
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1521 (nuc.)
Previous locus YALI0D27126g Next locus YALI0D27170g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27148g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27148gYALI0D27148g_mRNA-001YALI0D27148g_CDS-001

Nucleotide sequence

 

>YALI0D27148g
GACATTATACCTATCAATCATGGCGACCACAGCACAGGCTGCTATTCAGAGCATTGGCGT
GGCCAATCTGCCAAACCAGCGGTGAGTATGGAGAAGTGTGAACCGGTTATGGGCTCAGAA
ACACGGATACACTGGTTATGAGCTATCACTCGTCCTACGTGGAGACATTGTATACACCAC
TAACACAGACACAAGATTGTGGCCAAGAGTGGAGCTACCTTCACCCTTATGGTGGCTGGC
GAGTCTGGTCTCGGAAAGACCACCTTCGTTAACACCCTCTTCTCCACATCCATCAAGAGC
TACACAGACAACAAGACGCGGTTCAAGCGACCCATCAAGAAGACGGTGGAGATCGACGTG
ACCAAGGCCGAGCTGGAGGAGCGAGGATTCCGAGTGCGACTCAACGTGATCGACACTCCC
GGATTCGGTGACAATGTCAACAACCTAGACTCTTGGCAGCCCATTGTTGAATTTCTGGAC
GACCAGCATGAATCTTTCATGCGTCAGGAACAGCAACCAAACCGTGTCGGCAAGATTGAC
ATGCGAGTCCACGCGTGTATCTACTTTATTCGACCCACTGGCCACGGACTCAAGCCCCTG
GACATTGAGGCCATGAAGAAGCTGTCTTCTCGAGTGAACTTGATCCCCGTCATCGCCAAG
GCTGACACACTGTCGCGCAAGGAGCTGGCTATCTTCAAGCAGCGAGTTCGAGACACCATC
ATCGCGCAAAACATTCGAATCTACCAGCCCTCAGTGGATGAGGAGGACCAGCGAGCTGCT
GAGCACGCCAAGTCGCTTATTGACGCCATGCCCTACTCCATCATTGCCTCTGAGAAGGAC
GTGGAGACCCCTGATGGTCGAGTGGTCAAGGGCCGACAATACCTGTGGGGAGTTGCCGAG
GTGGAGAACGAGGACCACTGTGACTTTGAGAAGTTGCGATACCTCCTGATCCGAACCCAC
ATGCTGGACCTCACAGCCTCCACTGAGGAGCTGCACTACGAGTCGTACCGAACCCAACAG
ATGGAGACCAGAAAGTTTGGCGAGGCCCGGCCGCGAAAATTCGACAACCCTAAGTTCAAG
GAGGAGGAGGACGCTCTTCGAAAGATGTTCACTGAGCAGGTAAAGCTGGAGGAGCAGCGA
TTCCGACAGTGGGAGCAAAATCTCATTGCCGAGCGAGATCGACTCAACAAGGACCTCGAG
CAGACCCATGCTAGCATCAGAGCCCTGGAGCAGGAGGTCGAGCAGTTGACTATGAAGGCT
GGTAAGCGATAAATCTGATTTTGTTATTTATGGTTCCTCTTGCTAATCTAGGATGTTGGT
AATTTTGTAATGTATAATGGAGTGAACGTGGACGACGTTGAGCGTGACGAACGCGTAAGG
AATCGACACGACTGTGCCACAGGTGAACGACTAACAATATCCGGGGATTATGGAACGCGT
TTTAACAGCTCCCTTCGCTGACCCTGGCGTATCTTGATGCTGTGATGATGTATGTTAATG
TATTACTAATCAGAAGGATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27148g_CDS-001

Protein length: 382 aa.
Product: Component of the septin ring that is required for cytokinesis, putative

>YALI0D27148g_CDS-001 MATTAQAAIQSIGVANLPNQRHKIVAKSGATFTLMVAGESGLGKTTFVNTLFSTSIKSYT
DNKTRFKRPIKKTVEIDVTKAELEERGFRVRLNVIDTPGFGDNVNNLDSWQPIVEFLDDQ
HESFMRQEQQPNRVGKIDMRVHACIYFIRPTGHGLKPLDIEAMKKLSSRVNLIPVIAKAD
TLSRKELAIFKQRVRDTIIAQNIRIYQPSVDEEDQRAAEHAKSLIDAMPYSIIASEKDVE
TPDGRVVKGRQYLWGVAEVENEDHCDFEKLRYLLIRTHMLDLTASTEELHYESYRTQQME
TRKFGEARPRKFDNPKFKEEEDALRKMFTEQVKLEEQRFRQWEQNLIAERDRLNKDLEQT
HASIRALEQEVEQLTMKAGCW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG