YALI0D27104g

Overview

Description some similarities with uniprot|F9XAD8 Zymoseptoria tritici hypothetical protein MYCGRDRAFT_29011, partial
Locus type CDS
Locus tag YALI0D27104g

Location

Species Yarrowia lipolytica Positions 3606805..3607603
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 799 (nuc.)
Previous locus YALI0D27082g Next locus YALI0D27126g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27104g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27104gYALI0D27104g_mRNA-001YALI0D27104g_CDS-001

Nucleotide sequence

 

>YALI0D27104g
ATGGCATCATCCCGAACATCTTCAGTGGCCAGTACTAAGCGGCCAGCTATTTCTTTCAGA
GACATGGACGTTACCAGTGGCAGCATAGGCCGCAAATCCAACGTGTGGAAGGTCGGGCGG
ACCTACGGCGTGGGCGACATTGACTCGCTAACACAAGTGACCCCCATTCCGGTGTTCACG
CCTATTCCGGTAGGCCCTATCCGAATCGTCGATAATACCAACGATGAATACAGCATGGTC
TACGGAGGGGAGGATTACGACACGATAAATGAAAACGGTCGGCCTGAGCCGCGGGATGAG
CATGTCCCACAGGGAGTCTTGCCGGTTTGGGCAGCAGATGTCAATATTCCAGAATACAAC
ATTGTTGCAGGAGATAGCAAGGCGGGTGCATATGTGTCGTGGACAATTGTGGTGGAGACA
AAGTATGGAGGTCGTATTATTTTGCGACGGCGGTTCTCAGAGATTTACGAGATGCGGGAG
GCTCTCAAGCAGGAGTTCCCGCAACACAAGATGGAGATTCCCCAACTGCCTGCCAAGTCC
ATGTTTCAGCATTTCAACAAGACGTTTTTACAGAGTCGACGGCGTGGACTCGAGTACTTT
TTCCAGTGCGTTTTTCTAAACCCGCTTTTTGCGTCATCCAAAGTGTTGAAGGAGTTTGCT
GAGACGAAGTGATAGATAGTCGGGTAAGTTGGGACAGAACCTGGATAGAGAGATTTATAG
GATCATTATATTTGCATTTTCACAGACGGTGTGATGTCTAGCTACGTACAATACTGTACA
TACTGTACACTGTTCTGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27104g_CDS-001

Protein length: 224 aa.
Product: Conserved hypothetical protein

>YALI0D27104g_CDS-001 MASSRTSSVASTKRPAISFRDMDVTSGSIGRKSNVWKVGRTYGVGDIDSLTQVTPIPVFT
PIPVGPIRIVDNTNDEYSMVYGGEDYDTINENGRPEPRDEHVPQGVLPVWAADVNIPEYN
IVAGDSKAGAYVSWTIVVETKYGGRIILRRRFSEIYEMREALKQEFPQHKMEIPQLPAKS
MFQHFNKTFLQSRRRGLEYFFQCVFLNPLFASSKVLKEFAETK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG