YALI0D26950g

Overview

Description weakly similar to uniprot|P25386 Saccharomyces cerevisiae YDL058w USO1
Locus type CDS
Locus tag YALI0D26950g

Location

Species Yarrowia lipolytica Positions 3579836..3583433
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3598 (nuc.)
Previous locus YALI0D26928g Next locus YALI0D26972g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26950g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26950gYALI0D26950g_mRNA-001YALI0D26950g_CDS-001

Nucleotide sequence

 

>YALI0D26950g
ATGCCCACACTAGACGGAAACACCTGGGGGAACTCGGACCCCTCGCTGGGGTCGAAGGAG
GGCTCTTTCGAGATTCCCGACCATGTCCCCGGCGCAGCGCAATTTCGAGCGCGCCAAGAG
TTTGCAGCAGCGTCCAACGGGTCTGCACCGTTTGCCCGCAAGCTAGTAGGCACACAAATC
CCACAAACACGACACTCGCCGTCATCGTCAACACCCAGAGAATTCACACCGCTGCTGCGG
AGCGTCAAAAAGTCGTTCACAGCCACGCAGCAGCAACAGGCGTCGTACTCGCCCACAAGC
TCGAGGTTTCGAGGCACAAACAGAACCGGAGGACGTCCCGACCCGTTGTTGCCTTACGAC
GAGCTCTCGTACTCATCCAACGAGTTTGACAATATGTCTGGAATTCAGCGTGGCTCGCTC
ACGCCTCAACGGCGTCAGCAAAAGGGCCCCACGGCTACCAAGGGCCTCAACGAACTGCTG
TCCGAAAGCATGCCTCTCCGTGAACAGGAGACTCGAATGAAGGAGCTCAGTAACGAGAAC
ACCAAGCTCAAGATCGACTTGCTTCAGGCCCGACAAGAACTCCATCGCAACACACCGGCG
CAAATGAAGGAGATCCGAGAAGAAGTGGTGCAGCTACGATCAGACAACATGAGCCTGACC
ACAGAGGTGCAGCAGCTGCGGGTGATGCTGGAGGAAAGAGAACATTACATCACTCAGCTG
GAGGAACAGCTGCAACAACGAGACGAAACCAACAGGTCCATTAACAACATCGGAGTTGAG
GCCGAACTGGAGAGACTGCAGGGGCTGGTGGCTGACTCTGAGTACGAGGCCAACCGCAAG
CAGGAGGAGCTAGACGGAGCTCTCGACGAAATCGACACTCTCAAAGCCAAATTTGAGGTT
CTTGAACGAGAACGGGAGCAGGAGCGATACAATAGATCAGTCGATAGATCTATGGTAGAT
AAGTCCATGAACGACCAGACAATGGACTCTACCCGATCATCACGCCTCAACTGCACCCTC
GACCACAACGATGCACGATTCGAAATTACCAATCTGAAACACGACATTGACCAGCTTGTT
GCTGAAGTGAATCAGAAGGATGCTCAGGTTGATCAGGCTCAGGTGATTATCCAGAAACTC
ACCTCGGAACTGGCTGCCAAGCGAGAGGTAGAAGCTAATATCGACCGGTCGCATTCCACT
ACAGAAGAGACTCTGAGGCGTCAGATTGACGAGTACATTGCGCACATCGAGCGCATCAAG
GAGGAGAAGGAGCGAGATATCAAAATCATGCATGCAGATCTTGACGCTCATGTTCGAAGA
GCCGAGCATGACCATGCTGTTGAGCTTGACAGAGCTCGTACTGAGATTCAGCGACTCACA
AGTGAATTGGGTCTTAAGGAGTCTCAGATTTCCGAGCTTCAGACTCAAATGGAGCGGTAC
AAGACCGAGCTTGAATCTGTTCCAATGGAGATGGAGCCCTTACGGGCAGCTATTGCTCGT
CTGGAGCAGGACAAGCTCATGCTTGAGGGCACCATTGCTGATCTTGAAATCCAACTCAAG
CGTAACACTATGCGGGACGATGATCGACAACAGCTAGCTGCTCAGCGTGATGAACTCATG
CACCGACTCACTCAGGCCGAGAGTGAACGAAACCACTACCGTGAGAATCTCGAGAGCCGA
TCTCAGTACTGGGTCCATGAGAAGGCTCTTCTTGAGAGTCAGCGGGATAGCCTCCAGGAG
AAGCTAGACAATGTGGATCAGAAGCACTCCAATGGCCACACCCCATCCCGAGGCTATGCA
GCTATTGTTGCTCAGGAGCAAGAGAAGCTGCGTATCTACCAGTTACAGGCCGAACACACT
CGTGACGAGATGCAGAAGCTGATTGACACGCAGTACCAGGACCTGAGACGCCAGACAGAC
GAGCTCAACGCTGCCAGCAACGAGATTGCGCGCCTGGTTGCCGTGGACAAGAAGCTGCAG
GAGATGAGCAACAACATTGGTCTCATGGAGCAGCATTTCCAGGCCGAGCAGAACCGGCGG
GCTCATGCCGAGGAGAAGGGTCAAATTCTGGAGCAGCAGGTGCGAGAGGCTGAGGAGCGG
CTTCGAGAACTGTCGAATCGACCTCCTCCTCCTTCTCAGGGGCCAAACGAGTCTTTCATG
GCCCTCAACAACAATCTGCACGAGCAGAACCGAGAGCTACGAAGCCAAATTGATGCTGGG
AACCGGGAGCTCAACGGCTACAAGATTGAACTTGAGACTGCTACGCGACTTCAACATGGC
GCTGAGAAGAACGTCGAGTTCCTTGAGAAGCGTGTGGCCGAGCTGGAGCGGTCCATTAGC
GATTTGCGAGTTCACCTGGCAAAGGTTGAGCAGGAGAGGGACGATCTGGTGGTCAGGAAG
GAAGATGAGAACCCCCAGTCTTCTTTGGAGTACGCTCTATGCCTTCTTTCCGAGAAGGAG
GGCGAGATCGCGGAGATCAGAGCCACCTTTGCTGGCCAGAAGAAGAAGCTCGTGGAATAC
ATCAAGAAGCTCCGTGACGGCCGTCGTCAGACTCGATCTGAGATTGTACCTCTTCAGAAG
CTCAACCAAATGCTAGAGAAGGAATTGGAGGAGAAGGACGCTCTGTTGGCAGAGAAGGAG
GCTGCCCTAGCAGACAAGAAGACTGCCTTGGAGCAGGCTCAGTCTGTAGAAGCACTTGAG
GTCAAGCACCAGCATGACGTTGAGAGACTGGCGGCTGAGATTTACAGACTAAGAGGAGAG
AGAGATGTGTTGAGGAGAGACCTCAAGACGGCCAAGCGTGAGAGAGACGACTACGGGCAG
AGATACAGAGACTCTCAAGAAACTCATCAGCAGGAGATGGAGGAACAGATCAGAGCTATT
GAGCAGATGTCGCTTAAGGAGCCTTTCCGACCTACTACTGATGCCGACGTGTCTACAGGA
AGTCCGAGACACGGCTTCCAGCCTGGACCCAAGGCTAGAAGCCGAGGTCATGTCCACTCA
GACTACCTTGATGCTGAGCGGAATGGTTCTCGAGGCTCATCTCATCGATATGAGTCTTCG
TCACAACCACAGCCACCCTGTCTGGCAGGTGTCACGTCTTGTCACAAGTGTGAGGACGAG
ATTGAGTTCCTCAAGAGCGAGATTGTCACGTACGACCGCGGCGTGCGGTTCGAAATGTGC
CAGACGGCGTATTTACGTATCAAGCTGCAGCGGTCTCAGGAGCTCAGGGCGTCTTTGGTC
ATCCAGAAGGTCTACTATGACGCTCTCGTTGCCGAGCTGCGGTTCTGCAACAGAGCTGAT
CTCAAGCTTCTACAGTCTATGGGTCTGACGCCGACTATCAAGAAGAAGAAGCGAGCCATC
ACGTTTGGAGCCGTTGCTCAGATGGTTCTCGCGACGGTTATGCTCCGTCGTCTGGGAGAG
GAATATGCTGAGGACGAGCGCAAGAAGCAGCGACTCAAGGACCTCGCTGACACTTACAGC
TAGTGCCACTAACAGTACTGGCATTGCTGACGTTGCTGACAGTAGCTGACGACTGACAAG
CTAACGCCGCTAGCAGTCGCTAACAATTATTTATTATAATGGATATGGATATGGTAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26950g_CDS-001

Protein length: 1161 aa.
Product: Conserved hypothetical protein

>YALI0D26950g_CDS-001 MPTLDGNTWGNSDPSLGSKEGSFEIPDHVPGAAQFRARQEFAAASNGSAPFARKLVGTQI
PQTRHSPSSSTPREFTPLLRSVKKSFTATQQQQASYSPTSSRFRGTNRTGGRPDPLLPYD
ELSYSSNEFDNMSGIQRGSLTPQRRQQKGPTATKGLNELLSESMPLREQETRMKELSNEN
TKLKIDLLQARQELHRNTPAQMKEIREEVVQLRSDNMSLTTEVQQLRVMLEEREHYITQL
EEQLQQRDETNRSINNIGVEAELERLQGLVADSEYEANRKQEELDGALDEIDTLKAKFEV
LEREREQERYNRSVDRSMVDKSMNDQTMDSTRSSRLNCTLDHNDARFEITNLKHDIDQLV
AEVNQKDAQVDQAQVIIQKLTSELAAKREVEANIDRSHSTTEETLRRQIDEYIAHIERIK
EEKERDIKIMHADLDAHVRRAEHDHAVELDRARTEIQRLTSELGLKESQISELQTQMERY
KTELESVPMEMEPLRAAIARLEQDKLMLEGTIADLEIQLKRNTMRDDDRQQLAAQRDELM
HRLTQAESERNHYRENLESRSQYWVHEKALLESQRDSLQEKLDNVDQKHSNGHTPSRGYA
AIVAQEQEKLRIYQLQAEHTRDEMQKLIDTQYQDLRRQTDELNAASNEIARLVAVDKKLQ
EMSNNIGLMEQHFQAEQNRRAHAEEKGQILEQQVREAEERLRELSNRPPPPSQGPNESFM
ALNNNLHEQNRELRSQIDAGNRELNGYKIELETATRLQHGAEKNVEFLEKRVAELERSIS
DLRVHLAKVEQERDDLVVRKEDENPQSSLEYALCLLSEKEGEIAEIRATFAGQKKKLVEY
IKKLRDGRRQTRSEIVPLQKLNQMLEKELEEKDALLAEKEAALADKKTALEQAQSVEALE
VKHQHDVERLAAEIYRLRGERDVLRRDLKTAKRERDDYGQRYRDSQETHQQEMEEQIRAI
EQMSLKEPFRPTTDADVSTGSPRHGFQPGPKARSRGHVHSDYLDAERNGSRGSSHRYESS
SQPQPPCLAGVTSCHKCEDEIEFLKSEIVTYDRGVRFEMCQTAYLRIKLQRSQELRASLV
IQKVYYDALVAELRFCNRADLKLLQSMGLTPTIKKKKRAITFGAVAQMVLATVMLRRLGE
EYAEDERKKQRLKDLADTYS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG