YALI0D26510g

Overview

Description similar to uniprot|Q05785 Saccharomyces cerevisiae YLR206W (ohnolog of YDL161W) ENT2 clathrin binding protein
Locus type CDS
Locus tag YALI0D26510g

Location

Species Yarrowia lipolytica Positions 3533723..3535664
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1942 (nuc.)
Previous locus YALI0D26499g Next locus YALI0D26532g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26510g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26510gYALI0D26510g_mRNA-001YALI0D26510g_CDS-001

Nucleotide sequence

 

>YALI0D26510g
ATGTCGAAGTCCATCGTCCGTTCCATCAAGAACGTCACGAACGGATACACCTCGGCCCAG
GTGAAGGTCCGAAATGGTGAGTATACAATTCTCCCCTCTCTACTATTGCACAATCCCCTT
CTCATCACCACCGTTTTTTTTTCTCGCTCTACTAACATCTAGCCACATCCAACGACGCTT
GGGGTCCGTCCACGTTTGACCTTGAGGAAATCGCCAGACTCACCCACTCCAACCAGGAGC
TTTTCGAGGTGATGGACATGATCGATCGACGACTCAACGACAAGGGCAAAAACTGGCGCC
ATGTCATCAAGGCCCTCAATCTGCTGGACTACTGTATCCACTGTGGCTCGGAGAACGTTG
TTCTGTGGTGCAAGGACAACCTGTACGTGGTTAAGACCCTGCGGGAGTTCCATTACATCG
ATGAGAACGGCCGAGACCAGGGTGCCAGCATCCGTTCCCGAGCAAAAGAAATCACCTCAT
TGCTGCTGGACGATGAGCGACTACGAAACGAGCGGGCCAATCGGTCCTCCTGGAAGAAGG
GACGACGGGCTCAGGGAGACGACTACGGCTCTGACGAGGAGAGTGGAATTGTCTCTTCTC
GAACCAGAACCGCCGACGACCGACGAGACGACCGACGAGACGACCGACGAGATTCTCGAC
GAGATTCTCGACGACCCTCCAGACGAGGATCCACGCCAGACGATGACCTAGCCCGTGCGC
TTGCCGAGTCGCAGCGAACGGCCGACGAGGAGGCCCGAATGCGACAGAACGGAGGAGCCG
AGGACGAGGCTCTGAGAAAGGCCATTGCTCTGTCGGAGGAGGAGCAGAAGAATCGAGATC
TCGGTGGCGGAATGGCCCAGGGAACCGCACAGCCCATCAACCTCATCGACACAGACAGCT
TTCCCACTCAGTTCCAGCCACAGCAGCAGCAGCAGCAGATGCAGCCCACTGGCTATGATC
TGTTTGGCAACGCCATCTACGGCCAGCAGCAGCCCACCATGAACACTGGAGTGCTCCAGA
ACGCATACGCCACTGGAGGCATGTTCGACCAGCAGCCCAACCAGTTCCAGCAGCAGCAGC
AGCAGTTCCAGCCTCAGCAGCAGCAGTACACCGGATTCCAACCCCAGCAGCAGCCCCAGC
AACAGCAGTACACTGGTTTCCAGCAGCAAAACGACTTCTCTCAGTCCTTCCAGCAGCAGC
AGCAGCAGCAGCCTGCTGAGCCCCTCCAGCCTCTCAAAACTGGCTCTAACAACCCCTTTG
CAAAGCATGATTCTACAAACGGCTCTTCTTCCACTGGTCCCTCCCTCAACTTCATGGCTT
CTAACAACATGACCACCCAGGCACATCCCAACCACCAACAGCAGCAGCAGCAGCAGCAGC
AGCAACAGCAACCGGCACCCAAGCAGCGTGCGCAGGTCACTGGCGGTGCTCATCCCGAAC
TCAACAACCTGCTCATGACCGGAGACGGAGTCGACACCTTTGGAAACACTGGCGAGACCC
GAATCCCCGCACAGCACACCCGAGACACGTTCATGAACGCTCGTCTGCAGCCCCAGGCCA
CAGCCAACAACAACCCGTTTGTGGGCCAGCAGTACACCGGTATCCCCAGCACTCAGATCC
AGCCTGCAGTGACCGGCTACGGTTTTGGCAACGCGCCACAGCAGACCGGCATGCAGCAGA
GCAACGGACAGCAGCAGTACGGACAGCAGCAGTACGGACAGCAGCAGAACCAGCAGCAGT
ATGGTCAACAGCAGTATGGCCAGTTTGGACAGCAGCAGCCTCAGCAGCAACAGTACGGCG
GAGGAGCACCCCAGCAATCGCTGATAGATTTGTAAGATGCTTTTTAAGGAGGCGAATATG
CGAGACGATGATGATTCGATGCTTTTCTTTAGTGTAATGATTATGAAGTGGTTTCTTTAA
GCAAGCCACTGCTAACGATATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26510g_CDS-001

Protein length: 583 aa.
Product: Epsin-like protein required for endocytosis and actin patch assembly, putative

>YALI0D26510g_CDS-001 MSKSIVRSIKNVTNGYTSAQVKVRNATSNDAWGPSTFDLEEIARLTHSNQELFEVMDMID
RRLNDKGKNWRHVIKALNLLDYCIHCGSENVVLWCKDNLYVVKTLREFHYIDENGRDQGA
SIRSRAKEITSLLLDDERLRNERANRSSWKKGRRAQGDDYGSDEESGIVSSRTRTADDRR
DDRRDDRRDSRRDSRRPSRRGSTPDDDLARALAESQRTADEEARMRQNGGAEDEALRKAI
ALSEEEQKNRDLGGGMAQGTAQPINLIDTDSFPTQFQPQQQQQQMQPTGYDLFGNAIYGQ
QQPTMNTGVLQNAYATGGMFDQQPNQFQQQQQQFQPQQQQYTGFQPQQQPQQQQYTGFQQ
QNDFSQSFQQQQQQQPAEPLQPLKTGSNNPFAKHDSTNGSSSTGPSLNFMASNNMTTQAH
PNHQQQQQQQQQQQQPAPKQRAQVTGGAHPELNNLLMTGDGVDTFGNTGETRIPAQHTRD
TFMNARLQPQATANNNPFVGQQYTGIPSTQIQPAVTGYGFGNAPQQTGMQQSNGQQQYGQ
QQYGQQQNQQQYGQQQYGQFGQQQPQQQQYGGGAPQQSLIDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG