YALI0D26301g

Overview

Description similar to uniprot|P38902 Saccharomyces cerevisiae YOL005C RPB11 RNA polymerase II subunit B12.5
Locus type CDS
Locus tag YALI0D26301g

Location

Species Yarrowia lipolytica Positions 3496476..3497293
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 818 (nuc.)
Previous locus YALI0D26279g Next locus YALI0D26315g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26301g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26301gYALI0D26301g_mRNA-001YALI0D26301g_CDS-001

Nucleotide sequence

 

>YALI0D26301g
ATGAACGCTCCCGATAGATTCGAGTTGTTTCTGCTTCCCGATGGAGTCCCAAAGTGAGTA
TCTGGCGAGAAAAAGGGACGATAAACGACGATCGTGCACCAGGGCTGCTTCTTCGACTCT
CAAGACTGTTTTGGACACAGACTGATCTGATGTTCTGAAGCGATGCCAGTGTATCAGGGA
CGGTCAAGTGTTTACCGTGGTTCTAGGTCCGACGTAGAAATGTGCAGATTCGATCATTTT
ATGCTACAGTGATGATGATGGGGTCTGTACGAGAGAGACACTATCAACGAGTCTCTCTCC
ATGGGACGGCCTTTGTGAGCAGGCTCTTCGCCACAGCTTTCATGCTACGATGTCGTTTTT
ACCTCCATCGCATGTGTGACAGCGTTTTCCTCTTATCTCCCCTAACACAGACTTGAGGTC
ACCCCGGACACTCGAATTCCCAACTGCGCCAACATCAAGTTCGAGAAAGAAGATCACACA
CTGGGCAACCTGCTCCGATCACAACTGCTACACGACTCGCGGGTCATCTTTGCGGCCTAC
AAGGTGGAACATCCTTTATTTGCCAACTTTGTGCTGCGAATCCAGACCGAAGACGACTAT
TCGCCACAGGAGGCCCTCACAAATGCTTGCAACGCGTTGATCCGACAGCTGTCGGATTTG
CAGGAGAAGTTCCAGCGAGAATGGCGACTGCGGTACTTGGTTAACAATTAGGTGGAAAAA
GAGAAGCGCGAGTGAGCTACTTGCTTACTGACACGGATAACAAATAAACATATAGCATAA
TGATTGTATAATAGCAATTCTGGTACAGTAGGTACGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26301g_CDS-001

Protein length: 118 aa.
Product: RNA polymerase II subunit B12.5, putative

>YALI0D26301g_CDS-001 MNAPDRFELFLLPDGVPKLEVTPDTRIPNCANIKFEKEDHTLGNLLRSQLLHDSRVIFAA
YKVEHPLFANFVLRIQTEDDYSPQEALTNACNALIRQLSDLQEKFQREWRLRYLVNN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG