YALI0D26169g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D26169g

Location

Species Yarrowia lipolytica Positions 3478738..3480439
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1702 (nuc.)
Previous locus YALI0D26158g Next locus YALI0D26191g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26169g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26169gYALI0D26169g_mRNA-001YALI0D26169g_CDS-001

Nucleotide sequence

 

>YALI0D26169g
ATGGCGAAACCCAAGAATAAAAACAAAAACCGCGTCAAAACAGCCACGTCATCGACAACG
TCTACAGGTGCCACGAAGCAGGAAATGGCCTACCCCGAGGGTCTTTCTGCCGAGGAACGT
GCCAAATATCAAGCGGCATTGCTTCCTCATGGAACCCTCGTGGCAGGCATCAGATCGAGT
GACACAGACGAAGCTGTCCGACAAGGAGCCGAGGAGGTACTTTCTCTCAACTACTACTGC
CAAACCGAAGATCTCTCCTCCAAGCACAATGCCTCCATAACCTCGTTTGGATTCCACAGC
TCTGTTTGTCACTACAGTGCCCATGATCTCAAGCTTCTGGGCATCCCTCAGTTTGTGCCC
GGATGCCACGAGCCAGGCTTATTTTTGGCCATCTATGAAGAGATTCAAAAACGATACAAC
CCGACATATCTTGATGAGAGACTCAAACTGAATCTGTTTGACGTCTTGCACCATTCCAAC
CAGGCCATTGCTGCGCAGTTCACTCTCACGATAATCAGCAAGAAGGAAAAGACGTTTGGG
CTCAAGGGAACGCCATGTCTCAGACACTACTACGAGCAGGTGACGAGCGAGATGCCATGG
TCAGAAGTCAAGTTGCATTTTGTGGAGCGGTTCCGGTTCTTCACGTGCAAGTACGACTAT
CTTCTGTACCTGGACGAGTGCCTGGGCGAGATACGGCTGCAGTGGGGCAAACATAGACGT
TTTTTCAACCACGTGAGAGGCTGGTTGAATGCAGTGGAGGCAGTCCAGCCATTTGATGAG
ACTGACAGAGCTGACGTGCTTAAGGCCATCTTCCTGCTGGTGCCTTACGACCGACAATAC
TTTTGCATGCCCGAAGATATAGATACCAGTGACGCACCATACGAAAAGAGGGTGGCCGAC
TGTCTGGATGCATATGAGGCTCGGTGCGATTATCTGATGAAAGAGTTTGACAAGGAGATT
TATGACAAGCGGTTGGCAGAAAACAAAAAGCCGCGTCCTGTCAAGACTATAGAGCTGGGA
GAAATGGAACAGTGCAATGATAGCTCCTGTCCAGGCTCCACTGATGTCATTATCGACGAG
GTGGCTACGGGGTGTCCGCAGCACGAAATGGATGACTACGTGGCTGGAGAGACATCCGAT
GGTGCTATTGTTTGTGCGTCTCTTACTCGGGCTATTAGAAATCCCACTAAACTGGATCTC
GATGCTCCCCATTGTCACGTCCACATTGGCTTTTCTGCAGACGCTCCTGCCTTGAAGGCC
CTTGTATCGACTGGTACGTTTGCGTGTTGCATCAAAAAGAGCGTGGTGGAAAATCTTGGT
CTGGGTGATCAGGTTACCAAACTAAAGTCAGCCGAGTACATTCCTAGCGGCGGTGGTCCT
CTTAGATTCGAGTCTGTGTTGAATCTGCCACTGTGGTTCCCTTCTGGCCATCTAAAGATC
AACCGCTTTGTTATTGTCGACGGTCTTCCTGTCCCTATGATCATTGGTTCCGACTTTGTG
CACTACCACGATGCCATGGTGACCCTCCGAGGTTACAGTCTGAGCAGCGATGCCCCTTCG
TGTCCCAGCTACATGAGAGTTCTGCCTAGTGAAGATGGAGAGCCCAACAAGGGCACTTTT
ACCACCGCCAAAGCGGCGTTCCTCAGCTCCAGTTAGGCTCCACCCGCCCCTTCATAATTA
TATTTATTAGTCTCTGTACCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26169g_CDS-001

Protein length: 552 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D26169g_CDS-001 MAKPKNKNKNRVKTATSSTTSTGATKQEMAYPEGLSAEERAKYQAALLPHGTLVAGIRSS
DTDEAVRQGAEEVLSLNYYCQTEDLSSKHNASITSFGFHSSVCHYSAHDLKLLGIPQFVP
GCHEPGLFLAIYEEIQKRYNPTYLDERLKLNLFDVLHHSNQAIAAQFTLTIISKKEKTFG
LKGTPCLRHYYEQVTSEMPWSEVKLHFVERFRFFTCKYDYLLYLDECLGEIRLQWGKHRR
FFNHVRGWLNAVEAVQPFDETDRADVLKAIFLLVPYDRQYFCMPEDIDTSDAPYEKRVAD
CLDAYEARCDYLMKEFDKEIYDKRLAENKKPRPVKTIELGEMEQCNDSSCPGSTDVIIDE
VATGCPQHEMDDYVAGETSDGAIVCASLTRAIRNPTKLDLDAPHCHVHIGFSADAPALKA
LVSTGTFACCIKKSVVENLGLGDQVTKLKSAEYIPSGGGPLRFESVLNLPLWFPSGHLKI
NRFVIVDGLPVPMIIGSDFVHYHDAMVTLRGYSLSSDAPSCPSYMRVLPSEDGEPNKGTF
TTAKAAFLSSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG