YALI0D25696g

Overview

Description weakly similar to uniprot|O74508 Schizosaccharomyces pombe SPCC594.05c
Locus type CDS
Locus tag YALI0D25696g

Location

Species Yarrowia lipolytica Positions 3420542..3422268
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1727 (nuc.)
Previous locus YALI0D25674g Next locus YALI0D25718g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25696g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25696gYALI0D25696g_mRNA-001YALI0D25696g_CDS-001

Nucleotide sequence

 

>YALI0D25696g
ATGTCTTCTAACGACGCGACTTCGGACGATACAGACGCCACGGTCGAAGAAGACTTCAAA
CGGGAGCCCGAGACAGCTGCCAACCTCGAGAGCAACCCTCCTAGCGATCCGCCGGTTGAG
AATGAAGAGGCGAGTGACAGTGACGAGCCTAGTGGTGGATTTTCATACTCTTTGTTGAAG
AAGAGTGTTCCTATGAAAGAGAACCAAGCGGAGACAGCAAAGCCCGAATCTGTGATGAAA
TCCGACCCGGTTGTCAAAGCTGAGCTGCTCACGTCCGAGGCAGGATCAGCCACGCCCTCG
GCTACTGAATCGCCTCGAGAAACGCCCTCCGATCTGATGTCTCCCGACCCCGATCACATT
CCCAGCAAGTCTTCCAAGCGGCGTCAACCGAAACCCAAGAGCCGTCCTGCTCCGAAAAAG
AAGCTGAAAGTCGCCGTTGCGAAGGACTACAAGTTGCCCCCCGGTGCTCCACCCGTTGAC
ACCAGTCACCATGGCGACGAAGATCACCAGGATCTATTTTGTGTGTGCAGACGACCTGAC
GACGGAAAGTGGATGATTGGATGCGATTACTGCGAAGAATGGATCCATGGAAGCTGTGTG
GGTATAACTCCAGCCAGAGCAAAACTCATGCACAAGTTCTGCTGTCCTTACTGCACACAC
AAGGCCGAAAAGATGCGTCCCGGCGAAGAGGCCACGGTGGCCCATCAGATGACGCTGAAA
CACGGCACAGAAACCACCTGGAAGCGCGTTTGTCGACTGGAAGAGTGCCACAAGGCTGTC
TCATACCCCAGCAAGTACTGCTGCAGAGAACACGGTCTGGAGTACATGAAGGGCAGAGTG
GCTGCTCTCAGCACCAACAGCAACTCAAGTGTGGCTGACGACACTGAGGAGCCGTTTGGA
AAGCTTTCCGAGGAACGTCTAGCTGCCATCGTCCAACAGACTCCCAACCTGGCTGCGTTC
AAGACTCTAGGCTCGACTACTCCCGTCGAAGCGTCTCCTGTGACTCCTAAACAACCCTCC
ACGCAGCTCAAGTTTGTGGAACAAAAGCTCAAGTACATGACTCTGGTCAAGGACCGAACC
AAGAGTCTCAGTGAAGAGGCCGCTACAGCCGCGGGAGTAAGAAAGAAGGATTTATGTGGC
TACGATTCGCGTCTGGACAAGGATCATGACATCTGGGCGAATGAATTTGCTGCCCAGGAT
GAACTGGTGGGTATTGCCATGAGTGATGATACTAGTAAGACAGTCACTCCTTCCCACGAC
GCTCTACACAACAAGGAACACATTTGCTTGCAGGACAAGCGGAAATGCTATAACCATCTA
GGCTGGGCTGCTCTGATTACCGACCGGCTGAATTTGCAGCTGGCTATTCTCCAGCGGGAA
ATGGAGAGAAGCGAAGGCGACGAGGCCGATCTGAAGGAGATTGAGCGGCTGAGAAGCGTT
GAGAGTAAGACGTGGATCAAGTGAGAGGTGGGTGTGAAGAGAGTCTGATTTGGAAGAGGT
CAGAAATGTACTTTTAGATATTATTTATTGGAGTTACAGTACTTGTGAAAAAGTGAATCT
CAGAGAAGATTATTGGGGATACACCTATGTACTCGTACAACAACTCGTACAAGTACATAA
AATGATGTCTGTCCAGATTCTTCTGGTGAGGATACCCCAGCAAAGGTGCTAACTCCTCAC
TCCAGATTCTCAGCTATTTGTAGATTTAAGCGAAACATATACTTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25696g_CDS-001

Protein length: 488 aa.
Product: Conserved hypothetical protein

>YALI0D25696g_CDS-001 MSSNDATSDDTDATVEEDFKREPETAANLESNPPSDPPVENEEASDSDEPSGGFSYSLLK
KSVPMKENQAETAKPESVMKSDPVVKAELLTSEAGSATPSATESPRETPSDLMSPDPDHI
PSKSSKRRQPKPKSRPAPKKKLKVAVAKDYKLPPGAPPVDTSHHGDEDHQDLFCVCRRPD
DGKWMIGCDYCEEWIHGSCVGITPARAKLMHKFCCPYCTHKAEKMRPGEEATVAHQMTLK
HGTETTWKRVCRLEECHKAVSYPSKYCCREHGLEYMKGRVAALSTNSNSSVADDTEEPFG
KLSEERLAAIVQQTPNLAAFKTLGSTTPVEASPVTPKQPSTQLKFVEQKLKYMTLVKDRT
KSLSEEAATAAGVRKKDLCGYDSRLDKDHDIWANEFAAQDELVGIAMSDDTSKTVTPSHD
ALHNKEHICLQDKRKCYNHLGWAALITDRLNLQLAILQREMERSEGDEADLKEIERLRSV
ESKTWIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG