YALI0D25608g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D25608g

Location

Species Yarrowia lipolytica Positions 3410426..3412550
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2125 (nuc.)
Previous locus YALI0D25586g Next locus YALI0D25630g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25608g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25608gYALI0D25608g_mRNA-001YALI0D25608g_CDS-001

Nucleotide sequence

 

>YALI0D25608g
ATGTCGCGAAAAGACGCGTGGCCGACGGAGCAGATCGACGCTCTCTTTGCTGTGTTCGAC
AGCGTGGGTCCCAAGGAGCTGAACGAGAAGATGCGACCTGGGGCTCGGTTCGGAGACTTC
ATGGAACAGGCTTGTATGGGTGTGTTTGGCCAGGTGGAGCCCAGATTGATGACACGTGTG
CGGAGCCGGGTAGCCCGAATCAAGCGTGATTTCCTAGATTATCTGATTCTGCTTCGAGAA
AAAGAACGAGATCCTTCGGTGGCCGACGAGGAGTACTCCAAAAAGCTGGCTCTTCTGTAC
CAGCGCCTACCAAAGAGTCTTATTGGTCTGCAAGTGACGTTTGACCTAAAGGAGGATGCT
GTGGACAGCGAGGAGGATGTGTTGAAACCGACAAGGAGCTCTACCCCACCGGTTACTAAG
CCAAAGCCACTTTTTCGAGTCCCTGTCGACAAGACCAAGGTCAGAGACAACAAAATACCC
GCTCACGACGATAGAGTTCCCCTGGACACTCTCACGACAAAATACAAGCTGGACGGGTAC
GGTGGAGGTGCCACCGTGGAAAAAATGTCTGAAAATGGTCCCACATCAACGGGCAGTGCT
CCTGACAAATCAATTCAGATAGGAGAGGAGGATATTTTGTCTGGGCCGAAAAACCAGGTT
TCTGCCGCGGAAGCTCTCCGGAGGGAGGAAGCTGAGGCTGCCAAAGTCCAGAGAGAACGA
GAAGAGAGGCTCCGACTGCGCAGGGAGAGTTCCGAAGCACGGAGTTTGTTTGAGACAGAG
GAACATGACCAGAATTCCGATACCAAGACGTCTGAAAAATCTGAAAAGTCTGAGACGCCG
GTCTCGAAGTCAGAGTCGAGAAGCCTTTTGCGCAAAAAGAGGCGACTCGTAGTTACTGAG
GCCAAGTCAAAAAATCTTGAGATGGCATTGTCTGATGAGTATGAAGACCCGATCTTCGCG
CTCGCGGAAAAGAAAACGCAACTAAAGGAGACTGCCTCAGAAACACCAGCTTCACCACCG
GTAGGTAGTAGGAACGTGGGCGTGGAGCTGGAACAGACAAGATCCCAATCGAAAGATCAA
CCCGATTCCACCTCAAAGACGATGGACCGACAATACAGACCTCCTAAAGTGCACCGATCC
GATTCAGACTCTGATAGCGATATCGGGTCGCGTGCAGAGCTCTTCTCTCTTCCTACCAGC
ACTCCCAAGGCCGCCAAACGCCACAGCTTTGTCCAGGAGCGCCCCAGTCCCACCAAACGC
AACTCTTCGCGCTTGCAGCGAAGCAGCGTTCGTTTGGACGATGAGGTTGACGATGATCCC
ATGTCAAGAAGCGACCGCAGGTCGAGAAGTGTGCAGGTGTCCGACCTGGAACCTGGTCAA
GGAGACTTGGTTGAACTGCAACACCCTGTGACAGGTAGGGTATCTGTTGATGCAGACCAA
ATGTATCAACTGACTCTCCCAGGTGGAACTTCTACTACAGTTCCAACTGAAGCACCTAAA
AGAAAGCGTGGAAGACCTAGAAAAGATGTCTATACCATGGACGATGATGCCCTTTTCCCA
CCTTCTGTAGGTTCTTCCAGAACCTCTGCTACCGACTCCAGACCTGCCAAGAAGAAAACT
CAAGTCTCCATGTCTAGTGCAAATGAAAGACGCAGCTCCATTATGACGTCTACGCCGCAC
CCAGACACATCCATGTCGTCAAACTACCTGCCTCAGTACCTGGAAAGTATGCAGCAGTTT
CTTAGGTCTGTGGAACGGCTATACATTCTAGCTGATGGAGATACTGCCATGCGACGAGCT
CTTGCTCAGCTGGTGCAAGCAACCACCGAGAAGATTGAGAGGTCAGTTGATGATGGAAAG
TTACCATAGACCACAGCATGGAGGTGCTAAAGTACAAGTACGAGTACTGTACTGTACTGT
ACGTATTATGACTGGGAGATACTTTCTTCACAGGCAGGCGAAACATACAGTATGTGCTGT
ACAGTATGTACATTCGCACTAAGAAATCGTACTGTACCATTCCAGCAACAAAATCGTGAG
TACTGTACGATACCACATTCAGCCTACCAATTGCATCAACTAATTTATTCCCAACAATAA
TATCGTTCGATCTTATCGACTATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25608g_CDS-001

Protein length: 623 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D25608g_CDS-001 MSRKDAWPTEQIDALFAVFDSVGPKELNEKMRPGARFGDFMEQACMGVFGQVEPRLMTRV
RSRVARIKRDFLDYLILLREKERDPSVADEEYSKKLALLYQRLPKSLIGLQVTFDLKEDA
VDSEEDVLKPTRSSTPPVTKPKPLFRVPVDKTKVRDNKIPAHDDRVPLDTLTTKYKLDGY
GGGATVEKMSENGPTSTGSAPDKSIQIGEEDILSGPKNQVSAAEALRREEAEAAKVQRER
EERLRLRRESSEARSLFETEEHDQNSDTKTSEKSEKSETPVSKSESRSLLRKKRRLVVTE
AKSKNLEMALSDEYEDPIFALAEKKTQLKETASETPASPPVGSRNVGVELEQTRSQSKDQ
PDSTSKTMDRQYRPPKVHRSDSDSDSDIGSRAELFSLPTSTPKAAKRHSFVQERPSPTKR
NSSRLQRSSVRLDDEVDDDPMSRSDRRSRSVQVSDLEPGQGDLVELQHPVTGRVSVDADQ
MYQLTLPGGTSTTVPTEAPKRKRGRPRKDVYTMDDDALFPPSVGSSRTSATDSRPAKKKT
QVSMSSANERRSSIMTSTPHPDTSMSSNYLPQYLESMQQFLRSVERLYILADGDTAMRRA
LAQLVQATTEKIERSVDDGKLP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG