YALI0D25542g

Overview

Description similar to uniprot|C5FDL7 Arthroderma otae formyl- coenzyme A transferase
Locus type CDS
Locus tag YALI0D25542g

Location

Species Yarrowia lipolytica Positions 3404870..3406273
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1404 (nuc.)
Previous locus YALI0D25531g Next locus YALI0D25564g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25542g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25542gYALI0D25542g_mRNA-001YALI0D25542g_CDS-001

Nucleotide sequence

 

>YALI0D25542g
ATGCTTCGTATCAATCGCGTTCGACAGTTCTCACACATCAGAAGCTTCTCCAGCACGTCA
CGTGCCCTGAACTCCGGCTCGTCGCTTCCTCTGGCTGGGGTCAGAGTGGTGGACATGTCT
CGGGTTCTGGCCGGACCCTACTGCACACAATTGCTGGCTGATCTGGGAGCAGACGTGATC
AAAATCGAACACCCGACTCGTGGCGATGACACTCGAGCCTGGGGTCCGCCGTTTGCGCCA
TACACAAAGACGGATGACTCTCTTGGAGTCAGTAGGGATATGGTGGAGGTTGCAGGCACA
GCACCTGGCGAGTCGGCTTACTTTCTTTGCGTGAACCGAAACAAAAAGTCCGTCGGCCTG
TCCTTCCAGTCGGACGAGGGCAAGGCTGCTCTCAAACGTCTTATTGCTTCTGCTGACGTG
TTTGTCGAAAACTACGTTCCTGGCACTCTCAAACGGTATGGACTCAGTTACGATGATCTC
AAGGATGCTAACCCCAAGCTCATCTACACATCCATCACAGGATACGGCCAGACTGGACCT
TACTCGCACCGACCCGGCTACGATGTCATGGTTGAAGCGGAAATGGGACTCATGCATATC
ACCGGAGAACCGGATGGAGCTCCCTCCAAGGTCGGAGTAGCCGTGACTGATCTCACCACC
GGCCTCTACGCATCTAACTCCGTGCTGGCAGCTCTCATTAAGCGAGGCGTTTCCGGCAAG
GGCACGCATATCGATGCCTCTCTAGCCGACTGTCAGGTGGCTTCTCTTGCCAACATCGCC
TCTCAGGTGCTCATCAGTGGCAAGCCTGACTCGGGCCGACAGGGAACTGCGCATCCGTCC
ATTTGCCCCTACCAGGCCTTTGATACCGCCGATGGAAGCATTATGATCGGAGGAGGCAAC
GACAATCTGTTCAAGTTGGCCTGTGACGCTCTGGGCAAGCCTGAGTGGAAAACTGACCCC
CGGTTCTTGTCCAACGCCCTTAGAGTCAAGAACAGAGACATTCTGGTGCCTGCCATTCAC
GAGGTGACCAAGACCAAAAAGACCAACGACTGGGTTGAAATCTTCAAGGTCTTCAACTTC
CCATTTGCCGCTATCAACGACATTCAGACCACGCTGAGCAACGAGCACGTTGTGGCACGA
GACATGATCCAGACTGTGGATCACCCCGTTTGTGGTCCCATGAAACTCGTCGGTGTCCCC
GTCAAGTTTTCTGACAAGACGTCGCAGCCCAACATTCGAATGCCCCCGCCTCTGCTTGGT
CAGCACACCTTTGAGGTCTTCCGAGAGGTCGGGTACTCTGATGCCGAGATCAACAAGCTC
GTCCAGGACGGCGTTATTCGGGGCCGAAGTGACTCGGTTTAGTGTATGTATAAAAAATAA
TGATTCTATGATTTACGAAATACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25542g_CDS-001

Protein length: 454 aa.
Product: Formyl-coenzyme A transferase, putative

>YALI0D25542g_CDS-001 MLRINRVRQFSHIRSFSSTSRALNSGSSLPLAGVRVVDMSRVLAGPYCTQLLADLGADVI
KIEHPTRGDDTRAWGPPFAPYTKTDDSLGVSRDMVEVAGTAPGESAYFLCVNRNKKSVGL
SFQSDEGKAALKRLIASADVFVENYVPGTLKRYGLSYDDLKDANPKLIYTSITGYGQTGP
YSHRPGYDVMVEAEMGLMHITGEPDGAPSKVGVAVTDLTTGLYASNSVLAALIKRGVSGK
GTHIDASLADCQVASLANIASQVLISGKPDSGRQGTAHPSICPYQAFDTADGSIMIGGGN
DNLFKLACDALGKPEWKTDPRFLSNALRVKNRDILVPAIHEVTKTKKTNDWVEIFKVFNF
PFAAINDIQTTLSNEHVVARDMIQTVDHPVCGPMKLVGVPVKFSDKTSQPNIRMPPPLLG
QHTFEVFREVGYSDAEINKLVQDGVIRGRSDSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG