YALI0D25432g

Overview

Description some similarities with uniprot|C7ZPH7 Nectria haematococca predicted protein
Locus type CDS
Locus tag YALI0D25432g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3389579..3390107
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 529 (nuc.)
Previous locus YALI0D25410t Next locus YALI0D25431t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25432g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25432gYALI0D25432g_mRNA-001YALI0D25432g_CDS-001

Nucleotide sequence

 

>YALI0D25432g
ATGCCTTTTTGTAGAGCTGCACTCAGCTTCGACGTTGTCCTACTCCGAAACACGGCGGTT
TTGTGGCACATGGAGTTGTGTAGGGAGGTTCAATCTCCCGTTTGCCGTCTAGACAAGATT
GATGATGACGTCCTGGCTGTGTCTGTCAACAACAGCTACTCGTGGAAAACGATTGTGAAT
TACATTCACAAGCGGTTCGAAAACTGCCTGGACGGGTGAACTGAACGTCCATCAACGACA
CGCGGATCCACGCCTGCTCCTCTTCATCCAGCCCACGGGCTACTCGCTCAAGCTCCTGGA
CATCACCGTCAAGAAGAAGCTGCACAAGAAGGTGAACCTGATCCCCGTGATTGCCAAGTC
GGAAACGCTGACAAACGAGGAAATAAAGAACTTCAAACGGAAGATTCTAGCCTATATCCT
GCACCAGGAGATTGACATCTTTGCCCCTCCGCAGCATGAGAACATCGACACCGAGCCCGT
CACCGAGACTCACGAGATCATGTCCAAGGTGCCTTTGCAGATGTGGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25432g_CDS-001

Protein length: 176 aa.
Product: Conserved hypothetical protein

>YALI0D25432g_CDS-001 MPFCRAALSFDVVLLRNTAVLWHMELCREVQSPVCRLDKIDDDVLAVSVNNSYSWKTIVN
YIHKRFENCLDG*TERPSTTADPRLLLFIQPTGYSLKLLDITVKKKLHKKVNLIPVIAKS
ETLTNEEIKNFKRKILAYILHQEIDIFAPPQHENIDTEPVTETHEIMSKVPLQMW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG