YALI0D24453g

Overview

Description weakly similar to uniprot|B6Q1P8 Penicillium marneffei PMAA_036910 Putative uncharacterized protein
Locus type CDS
Locus tag YALI0D24453g

Location

Species Yarrowia lipolytica Positions 3246715..3250072
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3358 (nuc.)
Previous locus YALI0D24431g Next locus YALI0D24475g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24453g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24453gYALI0D24453g_mRNA-001YALI0D24453g_CDS-001

Nucleotide sequence

 

>YALI0D24453g
TAGCATAACTCTGGACAAGTCGACTGTTGGACCAAGACGACAGACAGCTCGGTGACAAGA
GACAACGGAGACAACCGAGACGACACAAACAACACAAACAGCCCAGTGACAAACAGCTCC
ATTTCCGCGGCAACACAAGTTGATCAAGTACAGTGAGTGAATTGAGTGAGAGAAGGATGG
GGGAGGATGGGGGAAGAGGATGAGAGGAGAAGGGTTCTGAGCAGTCTGAAGCTGTCTAGA
GCGGTCTTGAGCAGGTTGAAGCCATCTAAAGCTGGTCTGGAGCAATTCGGAACCACTAGG
GCGGCTTTGGGTGGTTCTTAATGAGACAGAGATCGTCCAAACCGGGCCAGGGGGGCTTAG
GGTGGTTCAAAATGGTTCCTAGTGCCAAGAGCAGGTCAGAGCAGACCTCAAGCTCTTCGG
ACCAATTCTGAGATGTTTCTGCACTGCTCTGAACAGACTACAAGTCCCTCAGAGCAGACC
CGGAGCTCTTCAGACTAATTGCGAGCAGCCATACCAATCCAGATAAGTTCAAGAAACCCA
CGGGAATCCAGTGACTCAATCATGCCCTCTGAAGGGCTCCAAATGGCCCCGTTTCCCCTA
TGGCACTAGCCACGACGCCCGAGCGACCACACAAGAAGGAGCTATGGTCGCCAGTTACTC
TTGTATCATTGCTACAGGTGCTACAAGTGCTACAAGTGCTACAAGTGCTACAAGTGCCAT
AAATACACTACTGTCTGACACCTACTCGTACCAGACACAACTCCAGGGAGAGAATTGAGA
AGTAGGCCCAGTTCATCGCGTGACCCAAGTCTTGCAAACGATGGCAGAGCCGCGCATCAC
ACATCACGTGATCACCCCATACCTTACCCCACGTGACCACGGACCCACCGCTCCAAACCG
GCCAAGGCTCTCCAATCTCTACAATCCCTGCAATCGCTCGTCTCCCACCACCTCGTCTAA
TTGTACGTATACTAATTTAGGTTTGACGCGTTTCGTGAATTGAATTGATTGACCAGAATC
GACCGAGACCAAGCCCGACTATTTTTCTTCTCCACCAATGAGCGGCGAAACGAGCGGCGA
ATCGAACGGCGAAACCAACGGCGTGAGCGTCAGCGGAGTCAACGGCGACTCGCGTGAGCA
CCACGATCACGTGCCCGCCCGTGCAACTTCAGCGACCGCAGACCCTGATGGCGATGTGAC
CATGGGCGATGTGGCTACGGGCGAAGTTGATCATCCGCCGTCTGAGTTGGCGGCAGATGA
GTCGGCGGTAGATGAGTCGGCGGTAGATGAGTCAGCGACAAAGGCTGGCAAAACCAGGTC
CAGCTCCAACACTGGGACCAAGTCTGATGACAAATCGGAGGTGACCGGGGCTGACGCTGA
GGCGGCTACAGCGGCTGCAGCGACTCTGGCGACTCCGGCGACTCCGGCTACGGCTGCGGC
GACTTTGGATACTGCAACTACCTCGACTCCCACCTCCGACGACATTGTGGAACCCCCCTC
CAAGCGCCAAAAAGTAACTGATTCTGAGTCGACTGATGTAGCTACTAGTGAAATCGCCGA
GTCCACACAGTCTTCAGACGACAAAGGTGACGAGAAGAATGTTCCAGATGACAAGGATGA
CAAGACTTCCTCAGTCCAGAACAATGACTCTACTACAACCATGCCCCCCACCACCGTAAC
CCCCGCTAAAACCGCCAAAACGACCAAATCGTCGGCAAAAAAAGACGGCAAAATCTCCAC
TTTTTTCTCCTCCACCAACGGCGACTCCAAGTCTAGAGCAACCACGCCGTCCAAAAAGGC
CTCCACGCCGTCCAAAACCGCACCCAAGACCACAGCGTCCTCAGGAACCCCATTGAAGCT
CAGACTGAAGACAAAACCGTCTCTCCCGGCTCTGGAAGAAGACCACGACGAGGAAAACGC
TGGACCGCAAATCGAGTTGGACAAGGACTCGATCCAGAACCACCCGGACATTGCCTTCTG
CGTCATGTTCCGCACGCGGTTCACCGACCTGTTTGACGGCTGGTGTCCCCCGCTCTCGCC
CCAGGAGTTTGAGGCCGGGATCCAGCCCGAAGAGGGCTTCTCGCTGGCGGTGGAATCGTA
CCTCGTCCGCGTCATGTCGCTCATGATGAACCGTAAAAAACCCGTCGAGGTCGGCAAGTA
CTCCAACGCCCTGGAAACATGGTCTACCATGCCCCTGGCCCAGGGCTCCGTGTCGACCAT
CGACGCCATGAGCCTGCCGTGCGGGTGGAGCAGAAAGCTTGCGTCCCGAGACGTGGTGGC
AATGGACTGGCGCGGCCGCCTGCAGTTGCTCAAAATGGCCACGGTGGCGGCTCTGTCGCT
GTCGGACGCGGTCAAAAAGTTGATTGCCGACAAACGCGAGGTGTCCGGCCGAAAAGTTCT
GTCTGAGCTCCAGTGGCTGCCTCTGGGCGAAGATTGCGCCAGAAACACCTATTGGCTGGC
CGACGGCTCCGGAGACATTAACTGGGACGAAGATGGGAAAATCATCCCCGCCACAGAAGG
CGCCTTTGACACCCAATGGAGATTGTATCGACAAACCAACCCGTACAAGGCGGTGGTTTC
GTGGGTGCCGGTGGCGTCGTCGCCGGAAGACTTGGCCACGCTGATTGAGGAGATGCCCAA
ACTGAGTCCCGCAGACTCTGCAAAGTCCTACACGCCGCTGCTGGAGGCGCAGCACAAACG
GCTGCTGGGTAAGCTGGAGGAGCTGATTCCGCGAACGCTGTCGTCGCGTGACCGCATCAG
GGAGGCCGAGGAGCGTGTGGTTGCTCAGCAGGCGAAAAAGGCCGCCGCTGCACGTGCCCA
CGAGTACCAGAAGAGCAAGATTGGTGCCAATCGAGGTCGCACTCGGGGCAAGCGGGTGGA
CTACAAGCAGCTTGCGGCGCCTCAGGACTCGGAGGACGAGTATGAGCTGAAGGAGGAGGA
GGCCGTCGCTCAAGGCCATCGACGGACTGGGCGAACCAGAACAGCCACCGTTTATGAACC
TGCCTATGATGAGGGGGAGGACGGAGACGAGTTCGAGGTGACTCCTTCACCGGAACCGGA
GCCCAAGCCGGAAACACCGAGAAACGCCGAGGGTAAGAAGATAAGATATGTGGAGAAACA
GGGAGGAGGAAGGAGAGGAAAGGGATGGGTCTATGTTGTGGAGGAGGAGATTGAGTAGGC
CCGAAGGCGTTCGATCTAGGAGCTTGCCACGAGAGTGTGTGCAGGAGTGGGCGTGACTGC
AATTGGAGTGACATGGTGACTCTGTTCTACTGCTAATCAAAACAGTCTCATCTCTCTACT
GCTTCTGAAGGACTCTAAATTATATACTGTATTGATATGTTTTGATATTCGACTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24453g_CDS-001

Protein length: 707 aa.
Product: Conserved hypothetical protein

>YALI0D24453g_CDS-001 MSGETSGESNGETNGVSVSGVNGDSREHHDHVPARATSATADPDGDVTMGDVATGEVDHP
PSELAADESAVDESAVDESATKAGKTRSSSNTGTKSDDKSEVTGADAEAATAAAATLATP
ATPATAAATLDTATTSTPTSDDIVEPPSKRQKVTDSESTDVATSEIAESTQSSDDKGDEK
NVPDDKDDKTSSVQNNDSTTTMPPTTVTPAKTAKTTKSSAKKDGKISTFFSSTNGDSKSR
ATTPSKKASTPSKTAPKTTASSGTPLKLRLKTKPSLPALEEDHDEENAGPQIELDKDSIQ
NHPDIAFCVMFRTRFTDLFDGWCPPLSPQEFEAGIQPEEGFSLAVESYLVRVMSLMMNRK
KPVEVGKYSNALETWSTMPLAQGSVSTIDAMSLPCGWSRKLASRDVVAMDWRGRLQLLKM
ATVAALSLSDAVKKLIADKREVSGRKVLSELQWLPLGEDCARNTYWLADGSGDINWDEDG
KIIPATEGAFDTQWRLYRQTNPYKAVVSWVPVASSPEDLATLIEEMPKLSPADSAKSYTP
LLEAQHKRLLGKLEELIPRTLSSRDRIREAEERVVAQQAKKAAAARAHEYQKSKIGANRG
RTRGKRVDYKQLAAPQDSEDEYELKEEEAVAQGHRRTGRTRTATVYEPAYDEGEDGDEFE
VTPSPEPEPKPETPRNAEGKKIRYVEKQGGGRRGKGWVYVVEEEIE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG