YALI0D24343g

Overview

Description weakly similar to uniprot|P47045 Saccharomyces cerevisiae YJL054W TIM54 Component of the mitochondrial Tim54p-Tim22p complex involved in insertion of polytopic proteins into the inner membrane
Locus type CDS
Locus tag YALI0D24343g

Location

Species Yarrowia lipolytica Positions 3221168..3223030
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1863 (nuc.)
Previous locus YALI0D24321g Next locus YALI0D24354r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24343g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24343gYALI0D24343g_mRNA-001YALI0D24343g_CDS-001

Nucleotide sequence

 

>YALI0D24343g
ATGGCTGACGAAACCGCACCAAAGTCGTCGAAACCGACCGCCGAAGCGGCGCCCAAAAAA
ACCGGATACACCAACCCGGCCCTGAGAGCTATGGGGATCCGTCAGCTGCGGCTGCCGTCG
CGAAACTGGATGATTTTCTGGACCGTGGTTGGCACGATTTCCGGTGGAATCTACTACGAT
CGTCACGAGCGGAAAAAGGTGCGCCAGCAGTACAAGGACGCGGTGGCGTATCTCGGAGAG
CGTCCTCTAGGTGGGCTGGAGATTCCGCGGAAAATCACCGTCTTTGTGGCGCCTCCGCCG
GGCGACTATCTCGACCATGTGCTGACCCACTTTCGAGCATACATCAAGCCGATTCTGACG
GCCGCGGCGCTGGACTTTGAGGTGAAGCAGGAGTCGCGCCAGGGCGAGATCCGATATGTG
GTCGCAGAGGGCATTCGAAACTACCGACGGGAGCAGATGGGCCTGCCCAAGGTGCCGTCG
CGACTCATGGTCGACGAGGAGGAGTACAACAAGGCGGTGGCGGAGCAGAACGCTGAGGTC
GAGAGACTCAAGGCCGGCCGGGAAAAACACACCAACCCCAACCCCACGTTCCAGGCCTTC
AACTCCATCAACAACAGACCCGGAGCACCCTCTTCTCCCGACTCGCAGCCCGAGGAGCAA
ATGTCCATCTCCGTCGCCGGCACCATTGCCCAGGAGCAGCTTGACAAGGAAATCACCTCC
AAGCTCGAGTTCAACCCCGAGTCCGGCGTCATTTGCGTCGGCCGGGGCGCCTACAAAGAG
TACCTTGCCGGTCTGCACGAGGGCTGGCTGGGGCCTCTGGAGGACCCTCGACCGGACGAG
GATAATCGAAAGGTCTATGAGGAGTTTCCCAACCGAGAGAAGGATGACGATGATGCGTTG
GGTCTAGTCAAAACTCCAGTCGAAGAGCCTACTACTGCTGTTCAGAATGTTCAATCTGTC
TCTGAACACCTCAACTCTCACCCGGAGATGGTGAAGGACGTTTCGGAGACCATTTCTCAC
TCTGGAGACGTGACCGCCGTCACTGACGTTGAACAGACCGCGGCAGGACCTGTGGATGTC
GTCTCCGAAACGGCTTCGACTCACGACACGCCCGCAGCCTCCGACAACAAGACCCCCAAG
CCCCTGTCTGAAATGTCACCCTCCGAATGGGACCCGAAGGCGCCGCTGCCTGAAATCAAG
CGAAAGCCCGTGCCCAAGCCGTATATTCGACCAGAGGAGTACTCCGAGGCTGAGCTGTCC
GAGTTTTACGCGTCTGGCTTTGAGAACGCGTCCACAGCGCACTCCACCGTCTCGTCCAAC
ATCAACCAACAGCCCAATGATCTCAACTCGCCTGCCGGATCTGGCACTGCCTTTGTCGAG
CAGTTTTTCTTTTCCCCCATCGCCGTGATTCCCCACCGACACATTATGGGCTTCATGAAC
ACCCCTCTGCGAATTGCGCGGTACTTCAACAAGCGTGCCGTGGCCGACGAGGTGGGAGCT
GCCACCGTGGTTGCTGTGACCGGAGACACCCGTCCTTTCGACGTCAAGACCGACCCCGAT
TTGCTGGTGTCCGAGGAGTATGACTGGCCCAGCAAGTGGGTCAAGAAGGGCCAGGATAAC
GGCAGTGAGTGGGTTCAGCCGGTGGTCGTGGACCAGAGAGTGATGGAGAAGGTCAAGGTG
TACCAGCCCAAAGGTGAGGGCGAGTCTGAGCTCAAGTAGAGCTGTAACGTGTGGATTGGC
TGTAATCCCATCCATCCTCCCAAATCGTATATAGTAAGGCTCTAAGTGGGTCTGTAAATA
GTCCAAGAAAAGTTTTGATTGACATGCAGTGCTGGGGGCGGTGTCAAACAAATGTGTAAG
GTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24343g_CDS-001

Protein length: 573 aa.
Product: Conserved hypothetical protein

>YALI0D24343g_CDS-001 MADETAPKSSKPTAEAAPKKTGYTNPALRAMGIRQLRLPSRNWMIFWTVVGTISGGIYYD
RHERKKVRQQYKDAVAYLGERPLGGLEIPRKITVFVAPPPGDYLDHVLTHFRAYIKPILT
AAALDFEVKQESRQGEIRYVVAEGIRNYRREQMGLPKVPSRLMVDEEEYNKAVAEQNAEV
ERLKAGREKHTNPNPTFQAFNSINNRPGAPSSPDSQPEEQMSISVAGTIAQEQLDKEITS
KLEFNPESGVICVGRGAYKEYLAGLHEGWLGPLEDPRPDEDNRKVYEEFPNREKDDDDAL
GLVKTPVEEPTTAVQNVQSVSEHLNSHPEMVKDVSETISHSGDVTAVTDVEQTAAGPVDV
VSETASTHDTPAASDNKTPKPLSEMSPSEWDPKAPLPEIKRKPVPKPYIRPEEYSEAELS
EFYASGFENASTAHSTVSSNINQQPNDLNSPAGSGTAFVEQFFFSPIAVIPHRHIMGFMN
TPLRIARYFNKRAVADEVGAATVVAVTGDTRPFDVKTDPDLLVSEEYDWPSKWVKKGQDN
GSEWVQPVVVDQRVMEKVKVYQPKGEGESELK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG