YALI0D23771g

Overview

Description weakly similar to uniprot|Q6C654 Yarrowia lipolytica YALI0E12331g, PIN-domain containing probable ribonuclease
Locus type CDS
Locus tag YALI0D23771g

Location

Species Yarrowia lipolytica Positions 3097187..3098765
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1579 (nuc.)
Previous locus YALI0D23754r Next locus YALI0D23793g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23771g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23771gYALI0D23771g_mRNA-001YALI0D23771g_CDS-001

Nucleotide sequence

 

>YALI0D23771g
ATGGGTATTAGAGGACTTACGGGATATCTGCGACCATTGTGTGTGCAACGACCGCCGCAG
TCGTTTGCGGACGGCGCCATGTTCATCGACGGCCACGCCATGGCTCACCAGGTGGCGCGA
ATGGGAAACGAAGGAGCCATGTACGACTGGCGGGGAGTAGGTCTGACCATGGAACGGGTG
ATGAACCAATGGATCCAAGACGGCTGGAATATTGAAATTGTGCTGTTTGACGGGCTCACT
CCCCGAGAAAAAATGGGGATCATCAACAAACGGGTGGCGGAGCGCATCCGAACTGCCACC
AGGTCAAGCTCCCTCAACCTGGCGGCGGCCTGTGCGTCCGTGTGCCAGGCAGTTCTGGTC
AACAAGTACCCCCAAATCAATTGCAAGATTGCGCCTGGCGAAACCGACGACATTCTCGCC
AGCATGGTGTGGAATTACGCCATTAATCATACCGATACCCCGACCTACCTGCTCACTGGC
GACTCGGACTTCTTTGCATTTGACTTCCCCGAAAATGTCACCATTGTGAACCCCCAGATG
CGCCACGGTATGTACAGTGCCCTCAATCTCACTCCCCAGGTCCGAAAGAAGAAGGGTGTC
CTGCCCTCGGCAGCAGCCTACATGATCAAAGAGAATATCAGATACAGCAGCGTGGAGACG
AACCCTAGGTACCTCGAATTTCTCGCCAGCCAGATGGACACTCTCAAGAGAAACTCGATT
TCCACCCATGACGAGTTTGCCAACAACGAACAAATGATGCATAGTTACAGGGTACTTGGA
GAAAACTCGTTCGATCAAGCTGGTCACCGCATCATCAATGGCCTGGTGGCCTCCAACGAG
CTGTACATGATGATGCCTATCATGTGTGAGCCTAGCGATTCTGAATTTTGTTTTGATGCC
GGACGCCGATGGAGATCTCTGGCCTACGAGGTCATTGCTCAAAAGGCGGGAGGCAAGGGC
ATGTACTTTTCCGAGTACGGACGCAACGGGTGGAATCTTGGAGAGCGAAAGATCCCCATC
ACGGACGGAAGCAGAGAACAGACTGACCGCCTGGAGGACTACAAGTACGGCTCCAGGGAG
ACTATCACATATGAGATCAAACAGTGGAAAACGAAGAAGGATATCGTGAATGCCATTTAC
AATGAGACGGCCCTCACTACTCTAAGTGGAGACGGGATTCTCAAATACAGCCCCGAGATT
ACAAAGCAGGCAGCCTTGGCGTATCTCAACGAGATTGTCGACTCAGTGGATAAACGTCGA
AGAGACATCTATCATAGAGATAGAGGCAGAAGCATGACGCCCACCTCTTTGCGAATCTAC
AACAAGATGCTCGCTTGTGTCTTGTCTCTGCGATTGCTTCAGTGCGTTGGGTTCAAGCTT
CCTGTCGAGCTCCAACTGTACGACATGGATGGAGCTCGATGGGGCCAAGTGGTCTTGGAG
ACCCATTCTCCCCGTCACAAGCCCATCAACGTGAGAAAAGACAGCAGGTCTCAGAAGAGT
GCTGACGACCTTGCTGACCAGATTGGACAGATGAAGATTGAGTCCTAGGTATTTATTGAA
TAAATCTGAAAACCAAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23771g_CDS-001

Protein length: 516 aa.
Product: Ribonuclease, putative

>YALI0D23771g_CDS-001 MGIRGLTGYLRPLCVQRPPQSFADGAMFIDGHAMAHQVARMGNEGAMYDWRGVGLTMERV
MNQWIQDGWNIEIVLFDGLTPREKMGIINKRVAERIRTATRSSSLNLAAACASVCQAVLV
NKYPQINCKIAPGETDDILASMVWNYAINHTDTPTYLLTGDSDFFAFDFPENVTIVNPQM
RHGMYSALNLTPQVRKKKGVLPSAAAYMIKENIRYSSVETNPRYLEFLASQMDTLKRNSI
STHDEFANNEQMMHSYRVLGENSFDQAGHRIINGLVASNELYMMMPIMCEPSDSEFCFDA
GRRWRSLAYEVIAQKAGGKGMYFSEYGRNGWNLGERKIPITDGSREQTDRLEDYKYGSRE
TITYEIKQWKTKKDIVNAIYNETALTTLSGDGILKYSPEITKQAALAYLNEIVDSVDKRR
RDIYHRDRGRSMTPTSLRIYNKMLACVLSLRLLQCVGFKLPVELQLYDMDGARWGQVVLE
THSPRHKPINVRKDSRSQKSADDLADQIGQMKIES*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG