YALI0D23749g

Overview

Description weakly similar to uniprot|P47043 Saccharomyces cerevisiae YJL056c ZAP1 metalloregulatory protein involved in zinc-responsive transcriptional regulation
Locus type CDS
Locus tag YALI0D23749g

Location

Species Yarrowia lipolytica Positions 3094340..3096726
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2387 (nuc.)
Previous locus YALI0D23738t Next locus YALI0D23754r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23749g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23749gYALI0D23749g_mRNA-001YALI0D23749g_CDS-001

Nucleotide sequence

 

>YALI0D23749g
ATGTCACACATGACGGACAAAATGAAAGAGGACCTGGCATACTACTGCTGCGATCTCAGC
GACTGCTCCGAGACCAGCGACTGCGACTCGTGCGATGACGACACAAACGACAAGACCAAG
ACCCTAAAGGGGACACAAAAGCGGACCCGGTCGTCGGCGCCAACCATCACCAAACGGCAA
CGAACAACTCGGGTCAAGAACGAACATGCCGACTGTGCCGAGTGTTTGGATGGCCCTGAG
GACGACGAAGACTGTCCGTGCGACGACGGCTGCGAGGTCCTGACACTGTCCAACCAACAG
GAGTTTGAGTCCTACATCAAGTCTGTGTTGGCGGTTGACTGGGAAGGGGAGGGCACTCAA
CAACAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAACAG
CAGATACAGGCACAGACACAACCCCAACAACAGCCACAACCAATTCCTCAAACACAAAAC
CAACACCTCTACCTCGACAACAGCGGCGGCAACAATAACAACCACTCTTCGAATATAACT
CCTCTAATGGACATCCATAGCCGTCTCCATGAACGCATTCCGGAACACCTCCTTCACCAC
ACACACTGCGACTTTGACCCTGTTTCGGACATGGACAATTTTTTGTCGCATCTCAAAAAC
GAGCACTTGACGGTCCCTGAAAACTTCCCCTTCCAGCTCTGCCAGACACATCCTGACCAT
GCCCATGGTGTCCACCATGCCAACGGAGTCCATGATCATCATATGGGTCACGTTGGCCAG
CAACATGGCCACCTGCAGCATCTGCAGCAGCATCAACACAGTCACGTGAACAATCACGTG
CACCCACAGGGCCACCAACACAACCACTCTGGTCAAATGGGCTCATCGTTCACACACATG
GCGGCACCGTCAATCCCAACACCCACCAGCTCGTCAAACACTCCGGCAGACAATGTTTCG
TCCTTACGCTCCACCCTGAGCATCCCGCAACCGTACCTGTCGCCAGCAAAAATCCTGCAG
TGCCATTGGGGCAACTGCAACTACAACACAGACTCCGCTGATGACCTGGACTGCCATTTT
GTGAATGCTCACAAGTATGACTTGAACCGGTACTCGCGTCACCAGACGGCTTGTGCAAAC
GCCATGAAGGTGTATCCCCAGGAGAAACGGCCTCCGGTAGGCATTTCTCCCTTTCAATGT
GAGTGGAACCATTGTCATTTCCGCAGCAACGACCTCACCGAGTTTGTGTCGCATTTGATG
GAGTCGCATCAGCTGCATACGTTTGAACACACTTGTTCTTCCAATAACCATTACCCTGGC
AGCTTTTTGGAGAATGTGTCAACTATGCTTCCGCTGACGTCTACTCCGTCTTCCGAAGGG
TCCCCCCTGAGTTACACGCCTCCTAGCACTTTTGACAACGACTTTGACTCTCCAAAGTAT
GGCCAGATGACCAATCCGACGCCCAGTACGAGCTCCTCTACCAGTCCCAGCGTCAACAGT
GCCGCCAACAGTGCTGCCAACAGTGCTGTGACCTCGACAGTAGCCAGTACGCCACCAGCA
TCTGCTGCCCCAGCCCCAGCCCCAGCAGCCACGGTGCACACGTGCCAGTGGGTGTTGGAG
AAGGACCCCAAGCATGTGTGCAAACTGCAATTTTCGTCGGCCAAGGACCTGTCTGATCAC
GTGATCGAGAAGCATATTGGCTCGCGGAAACCCGAGTACTCGTGCTCGTGGGACGGCTGT
GAGCGATGCGACAGACCCTTCACTCAGCGGCAAAAGGTGGTGCGTCATTTGCAGACCCAC
ACAAAGCACAGACCTCACCAGTGTCCTGTATGTCATTACCGGTTTGCCGAGGAGTCTGTG
CTCAAGCAGCATATGCGCATCCACAGCGGCGAGAAGCCCTTTCAGTGCCAGATTTGCCAC
AAGACGTTTGCGGCGTCAACCGCGCTTTCGGTGCACATGAGGATCCACACTGGAGAGAAG
CCGCTCACCTGCAAGTGGCCTGGGTGTGGTAAGCGGTTTTCCGAGTCGTCCAACTTGACC
AAGCACATGAAGACCCATACTTTGGAGAAGCCGTTTGCCTGTCCTCATCCGGGGTGTGAC
AAGCGGTTTGGAAGGAATGATCAGTTGCAGAGACATGTCAAGACGCACGAGGTGAAGGAG
GAACCTGAATGGAATGCTGGGTGGCAGCAAACCGTGGTTTAGGCAGTGAGGAGTTGCCAA
CAACAGCTGTGGCTACAAGACGGGCCTCACAGTTTTAGGGGAAGGAAAAAGTCGCGTGAA
ATACCGACACTAACAGCTATTTATAAACGGAATCTATTTACGACGTAAACAAACAGGTGA
ACTATAGAACAACAGGTTGACTATGGATCAACAAGAAGACAGATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23749g_CDS-001

Protein length: 734 aa.
Product: Conserved hypothetical protein

>YALI0D23749g_CDS-001 MSHMTDKMKEDLAYYCCDLSDCSETSDCDSCDDDTNDKTKTLKGTQKRTRSSAPTITKRQ
RTTRVKNEHADCAECLDGPEDDEDCPCDDGCEVLTLSNQQEFESYIKSVLAVDWEGEGTQ
QQQQQQQQQQQQQQQQQQQQQIQAQTQPQQQPQPIPQTQNQHLYLDNSGGNNNNHSSNIT
PLMDIHSRLHERIPEHLLHHTHCDFDPVSDMDNFLSHLKNEHLTVPENFPFQLCQTHPDH
AHGVHHANGVHDHHMGHVGQQHGHLQHLQQHQHSHVNNHVHPQGHQHNHSGQMGSSFTHM
AAPSIPTPTSSSNTPADNVSSLRSTLSIPQPYLSPAKILQCHWGNCNYNTDSADDLDCHF
VNAHKYDLNRYSRHQTACANAMKVYPQEKRPPVGISPFQCEWNHCHFRSNDLTEFVSHLM
ESHQLHTFEHTCSSNNHYPGSFLENVSTMLPLTSTPSSEGSPLSYTPPSTFDNDFDSPKY
GQMTNPTPSTSSSTSPSVNSAANSAANSAVTSTVASTPPASAAPAPAPAATVHTCQWVLE
KDPKHVCKLQFSSAKDLSDHVIEKHIGSRKPEYSCSWDGCERCDRPFTQRQKVVRHLQTH
TKHRPHQCPVCHYRFAEESVLKQHMRIHSGEKPFQCQICHKTFAASTALSVHMRIHTGEK
PLTCKWPGCGKRFSESSNLTKHMKTHTLEKPFACPHPGCDKRFGRNDQLQRHVKTHEVKE
EPEWNAGWQQTVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG