YALI0D23419g

Overview

Description some similarities with uniprot|A7F944 Sclerotinia sclerotiorum hypothetical protein SS1G_14125
Locus type CDS
Locus tag YALI0D23419g

Location

Species Yarrowia lipolytica Positions 3044678..3046951
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2274 (nuc.)
Previous locus YALI0D23397g Next locus YALI0D23441g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23419g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23419gYALI0D23419g_mRNA-001YALI0D23419g_CDS-001

Nucleotide sequence

 

>YALI0D23419g
ATGGCTCTCGTCATTTCTTATCTCATCAACGGCCACAAAGCCCGCAAAAAAAGAGCCACA
GAAACGCCAGCGATGCACAGCCGCCGCTCGAAAGATATGTATGCCCATCCGGGCATTCTT
CACGCCAAGTCGCTGCTTCCTCGAGCAGCAGCCTCTTGTGTTTCAGCAGCAGCAGGGTTC
GCCAACATTTGCATCCGGCTCGCCACATATGCGGCAGAGACCACAGTAGAGTCTGCGCGG
GTCTCGACCGTGACGTCATTGGCTCTGTCTGTCAAGGCGATCGAAGGACTCATTTCCAAG
GCCAACCAAGATACCCCCAAGGCCGAGGGCTGGGCGGAGCTAGGAATAAACACAGCCCAG
CAGACAGTCACGCTAGTGCAACTGTTCACATCCATCTCGTTCCACTTCACGTCAACGTCG
ATTCACACGGTCTCGTCGTCCACCCAGGACGTGATCCACGTGATAGACTCTGTGTTTGGG
GACTCAGAGTCCTCCAGAGCAATCAGATACATTCTAGGCTTGGTGCGGCGCGAACTGGGC
CAGCAGGTGGGCATCTGGGAAATGTTGTCAGCCATGGTATGCTACTCCGTCGCCCATCCA
CGAACCTGGAACAACATTGAAGATGCGGAGACCCAGCTGCTTTGGGACGTGGTTGTCCTC
GAGACTGGAGTCACCATCTCCCAGCAGCTTCCCGACTCCGACCCTACAGATAGCTTCAAC
GAAGAGCAGGCCGTGGCACTGCTTCCCCCTGACGCCAGATACTCTCTCACAATCACTGAG
GAGAGTATCCGGTCGGTGGCCATCGAAGTAGTGGCCAAACGCCTGCCTCCACACATGGAC
GTGCCCCGAGATGCCCGCATCGTCTACGAAAAGTGGCAGCGACTGGATGATAACAACATC
AGGTATGAGCTCAAGTTTGAGAAGAGCGAAAAGACCTTCCGGGAGAGAAAAGGTATTGCT
CGACTAGAGCCCCACGAATGCGACCACGTGACTGACGCTGTCATCAAGACGCCTGATGAA
ACGTTTAGAGAAGATGACAATATCAAAGAGTCGATCCAGACCCAACGGATCTCGTCCCGG
TCTGTTTCCGAAATGGGAATCGAGAATCTGGTCCCTCGAACAGGCGAATACGAAGTGTAC
CCTCCAGGACACCTCACCAAGAACCTGGCTCGGTACGTGCGGTTCTCCAGTGCCTCTTAT
GGGCAGTCATTCATGAGACTTTTGGGTATTGGACGGTTCGATGTGCCTTTCAGCACCACT
GGAGCCCATCATTCCGAGCATTATGCGTTTGCTCATCATGCTGGGGTCAGTCTCGATCAG
ATTTTGTTATCCAGCTATAGCGACAAGGTGGTGGATACTTCCAGTGGCATTCTGTTGGAT
CATTTCATTGTTGTGGACCACGATCCCAAAGCGGTCGTTCTGACAATCAGAGGAACCTGG
GGTCTAGATGACGTGCTCACCGATCTGGCGTGCGAGTATGAGAACTTTGAGATCCACGGT
TCGTCATACAAGGCCCACCACGGCATTTTGAGATGTGCCCGTAGCATGATTCGCAAGAAC
AGCCGTGTTCTGAAAACCATCAAAACCGCCATGGACGGAATGGGCCCCGAGTATGGTCTC
ATAATCTGTGGCCATTCTCTTGGTGGAGGCGTTGGAGCACTACTAAGCATTCTTCTAACA
GTATACGACACCGAGATAGATGATTTTGTCACCTCCGAGCAGTCCATGCTGCCCCCTGGT
AGACGGGTTCATTGTTTCACATACGGCTGTCCCCCTACCATTTCAGAGCAGCTGCGAATC
ATGACCGAGCGACTCATCACCTCGGTGGTGTACGGCTGCGACATTGTGCCCAGCTTGTCT
CTTGGCATGCTCCAGGACTTCCAAGCCATAGCTCTTGCATTTCGCGATGAGAAGCGCGGG
GTTGTGGGCGAGACCAAGAAGCGGCTGTTTGCCCAGCTGGCCACCAGCAGAGTGCCGTAC
ATGTATCGGCAGGATGACTATCTGTTGACCTTGGCCAAGACACTGCGGGGCCTGATGCAG
AATGAGAAGCTTGTTCCTCCTGGACGAGTGATCCATATTTCTACCAATGTGTTGCTAGAA
GTTCACCAGGGCCGAACCAAGAAGGCCAATCGCGTGGTTGGCAAGGTTGTGTTGGATGTG
GAGCGGCGGTTTGGGGAGCTTGTTCTTGGGAAAGGTGTATTTGATCACTCCCCGATTTAC
TATGAGCAGGCCTTGAATACGTTGGAGCAGGGTGTCAACTCAGCCCCCAGGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23419g_CDS-001

Protein length: 758 aa.
Product: Conserved hypothetical protein

>YALI0D23419g_CDS-001 MALVISYLINGHKARKKRATETPAMHSRRSKDMYAHPGILHAKSLLPRAAASCVSAAAGF
ANICIRLATYAAETTVESARVSTVTSLALSVKAIEGLISKANQDTPKAEGWAELGINTAQ
QTVTLVQLFTSISFHFTSTSIHTVSSSTQDVIHVIDSVFGDSESSRAIRYILGLVRRELG
QQVGIWEMLSAMVCYSVAHPRTWNNIEDAETQLLWDVVVLETGVTISQQLPDSDPTDSFN
EEQAVALLPPDARYSLTITEESIRSVAIEVVAKRLPPHMDVPRDARIVYEKWQRLDDNNI
RYELKFEKSEKTFRERKGIARLEPHECDHVTDAVIKTPDETFREDDNIKESIQTQRISSR
SVSEMGIENLVPRTGEYEVYPPGHLTKNLARYVRFSSASYGQSFMRLLGIGRFDVPFSTT
GAHHSEHYAFAHHAGVSLDQILLSSYSDKVVDTSSGILLDHFIVVDHDPKAVVLTIRGTW
GLDDVLTDLACEYENFEIHGSSYKAHHGILRCARSMIRKNSRVLKTIKTAMDGMGPEYGL
IICGHSLGGGVGALLSILLTVYDTEIDDFVTSEQSMLPPGRRVHCFTYGCPPTISEQLRI
MTERLITSVVYGCDIVPSLSLGMLQDFQAIALAFRDEKRGVVGETKKRLFAQLATSRVPY
MYRQDDYLLTLAKTLRGLMQNEKLVPPGRVIHISTNVLLEVHQGRTKKANRVVGKVVLDV
ERRFGELVLGKGVFDHSPIYYEQALNTLEQGVNSAPR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG