YALI0D22682g

Overview

Description weakly similar to uniprot|F2SYW9 Trichophyton rubrum hypothetical protein TERG_08031
Locus type CDS
Locus tag YALI0D22682g

Location

Species Yarrowia lipolytica Positions 2933558..2936579
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3022 (nuc.)
Previous locus YALI0D22660g Next locus YALI0D22704r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22682g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22682gYALI0D22682g_mRNA-001YALI0D22682g_CDS-001

Nucleotide sequence

 

>YALI0D22682g
ATGTCCTCTGGAATCCTTCCGGCTTACTCAGCTCTCCTTTGTTCAAACTCTATCGTGCAG
CAATATTCCGCGCTACTCGTAGTTGGATTTTATCAACATCACGACTCGATCAGCATCAGA
ATGAGCCGTCGAAAATCCGCCAAAGCCGAGTCGCCCGCTTTAACCGAGACAGCCCTCAGG
GGTCCGCTGAGTCAGCCAAACAACCAGGCGTTTCTCGCGCAATTACGTAATATGCCCGAG
TTTGCGCAGTCGTTCCAGATGGTGCATCTGTTCAAACGAGCGCTGCAGGTGGCCGAGCCG
GTGGAGATTGAGGTGCTAGAGGAGGAGCTGATCACGTGCGACTTTGGACGATTGACGCGC
CAGATCACGTGGGCTCTCATCAGAGCCCACATGAGAATCAAGAAGAAACAGGTAGATGAT
GTGGAGCTGTGGAACATGGCAAAACGGGTGTGGGAGGGACATAGAGAGGAGTGGGAGGAG
GAACAGGAACGACTTAGAGATGCCAGCATCGATGCGTTCGGTGGTGAGCAAACTGAATCT
TCAGAACCCGCAAAAACCCACACAACCGATTCGGTCAACGGAAAGGATGATTCAGCAGAT
CACGAGACGTCACGCGACTTGTCACATGATCTGAAGCGCTCGCCGTCGCCTATTCCGTCT
CCTCCAGCGAAACGAACTCGATCTACACGTTCCCGTGCCAAGGCCGAGGCAGAAGCAGCC
CAGGAGGAGCAGGAGAAAAAGACAGCAGCAGCGCCGGCGGGCGGCACCAAGTCACGTGAT
AAGTCACGTGTGAAGAAGAAGGAGGAGCCGCCGCAGACGCCCGAGGTGGACGAGGAGGCC
GAGCTCGCGGCAGCGGCGGCGTTCTCGCGTGACTTGGATCAGCGGAATCATCTGAGAAAG
CTGATCATTCCCGATCTGGATTTCAACCCCTTTGCAGACTCGCCCACGTTGGTCTCGTCG
TTTAGCCGATTTACCGCGTTCCAATTGGTCAAAATCTGGTACCAGCTGATTCAGTGGATT
TTCGACCATGAAGACAAGTCACGTGAGCTGGTGGAAACGACTCTTCGGCTCACCGACTAC
AAGCCAGAAGAGTTGCGATCGGAGCCGCTGGGAAACGACTCTGGAAACCACGTTTTCTAC
CTGTTTGGAGACTCGCGTTTGTACAAGCGAGAAGAACGAACCAATTCGAGCGGATTTGAC
GTGCTGGACCTGGATCTGGACACGTGGTCGTGTGTGTGCGCCACGTGGGAAGACTGGGAA
GTGTTCATGGCAGGGCTCGAATCACGTGACCAGGAGCTGAAGCAGCAGGTGGGCAAGCAC
AAGGGCAAGAGCAAGAAGAAGGCGGCAATCGCTGATGTGGAGTCGTTGAAATACGACTCG
GAACTGTATGGGTTCTTCTCACGTGACGTGATGCCGGTTGTGTCTGAGGTTTTTGTGGAG
AAGGCGCGTTCATCTGCGTCACGTGACAAGGAACGGCTTTTGGAGGCGGCCATGGCTACG
CGTAAGACGTCTTCTCGAATCCAGGCTCTTCAGGCCAAGAAAGAGGAGCAGGACAAACTC
GAGCGCAAGGAGGCAGAGTCACGTGCTGCCCAGAAGATGGAGCGCAAGCGACTTGAGCGA
ATTGAGCTGCAGCGCAAGCAGATGGAGGAGAGGCAACTGGCTCGAGAGAGGCGGTTTGAA
AGGAGGAATGGGAACCGCGATTTGAAGAGCGAAGAGTCTGCTGGTGCCGAGTCGCCAGCT
GCCGAGTCACGTGACAGGAGACGTCAGCCTCCGCGGCGGGCTGCTGCTGTTGCAGCTGTC
ACGTGGACGTTTGATTGTGTCTGCGGAATTCACGGCGAGAACTACGAGGATGATAAAGCC
ATGATTGAGTGCGAAACGTGCAAGACGTGGATGCACATTGAGTGTTTGCGGGACCGGCGA
AATGTGGACACGGAGTCGTTTGAATGCGATGTTTGTGGGTCTCGTGAGGAACGGGAGGCC
CGGGCCCGTGAGAAGGCTCGGGTGGAGGAGGAGAAGGCGGAAAAGAAAAGGCGGGCCGAG
GAGGAGAGGGCCAAGGCCGAGGAGGAAAAGGCGAGACTTAAGAAGGAGAAGAATGCTGCC
CGGTGGCAGGAGCGCAAGAAGCGGATGAAGGAGAAGAAGGAGCAGGAGGCTCGTGAAAGG
GAGAGTGAGAGGGAAGGTGAGAAGGCACGTGAGGAGAAACCAGAGGAGAAACCAGCCGAA
TCACGTGTAGAAAAGAATGATTCTGGTGGCTCATCTTTTCAGGCCCATGTTTCACCTCAA
TCTGCTCCAATTCCTCAGCAATTTGGGTCTCCTCAAGGACACCTTCAACCTCATTCTCAA
CCGTTTTCTCATCAGGGACAAGAATTCCAGTCACATGCTCCTCAATATGGCCATCAACAG
CCCCCGTTTGGTCAACAACAGTTCCAAGCACAGCCACCATTCGGTCAACACTTTACCGGA
TCATCTCCAATGGGCCAACTTACACATGGCCATCCTCAACTTGGCCAAGGACAGTTTCAA
CTGAGTCCAAGTCACGTGAACCAGTCTGTTAACCATGCAAGTGGTAATGCGAGTGGTCTG
AATCATGTGACTAGTCCGAGTCATGTGACCCATTCCCCAGTTATTCAAAATCCTTTGTCT
CAAGTGGCCCATCATCCCGCTCATGTGACTGATCCTGCTGTGACTTCTCTTCCTCCAGTG
ACAAATGCAAACCAAACAAACACCTCTCCTTCAGTGACCAACCCAATGGCTTCTCCTGCT
GTGGCATCTCCTGCTGTGGCATCTCCAACGACGGAGAACGGGAACGGTCACGTGACGAGC
GGCGTGAACGGTGTATAGGTAAAGTATTGATGGTCATGAGATTGCTCCAAGTTGATTTGC
AAAAGTCATTAGGGAGAATGGTTGGAAGAAATTTCAAGTCGGTAACTTCTAGACGGTTTC
CAGTGCTCAGGGTAAGGAAGGACTGTGTTGATAAGGCGTCGATCTGTGTAAATATATAGT
TGTAAACTTGGTTTTCTGTTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22682g_CDS-001

Protein length: 946 aa.
Product: Conserved hypothetical protein

>YALI0D22682g_CDS-001 MSSGILPAYSALLCSNSIVQQYSALLVVGFYQHHDSISIRMSRRKSAKAESPALTETALR
GPLSQPNNQAFLAQLRNMPEFAQSFQMVHLFKRALQVAEPVEIEVLEEELITCDFGRLTR
QITWALIRAHMRIKKKQVDDVELWNMAKRVWEGHREEWEEEQERLRDASIDAFGGEQTES
SEPAKTHTTDSVNGKDDSADHETSRDLSHDLKRSPSPIPSPPAKRTRSTRSRAKAEAEAA
QEEQEKKTAAAPAGGTKSRDKSRVKKKEEPPQTPEVDEEAELAAAAAFSRDLDQRNHLRK
LIIPDLDFNPFADSPTLVSSFSRFTAFQLVKIWYQLIQWIFDHEDKSRELVETTLRLTDY
KPEELRSEPLGNDSGNHVFYLFGDSRLYKREERTNSSGFDVLDLDLDTWSCVCATWEDWE
VFMAGLESRDQELKQQVGKHKGKSKKKAAIADVESLKYDSELYGFFSRDVMPVVSEVFVE
KARSSASRDKERLLEAAMATRKTSSRIQALQAKKEEQDKLERKEAESRAAQKMERKRLER
IELQRKQMEERQLARERRFERRNGNRDLKSEESAGAESPAAESRDRRRQPPRRAAAVAAV
TWTFDCVCGIHGENYEDDKAMIECETCKTWMHIECLRDRRNVDTESFECDVCGSREEREA
RAREKARVEEEKAEKKRRAEEERAKAEEEKARLKKEKNAARWQERKKRMKEKKEQEARER
ESEREGEKAREEKPEEKPAESRVEKNDSGGSSFQAHVSPQSAPIPQQFGSPQGHLQPHSQ
PFSHQGQEFQSHAPQYGHQQPPFGQQQFQAQPPFGQHFTGSSPMGQLTHGHPQLGQGQFQ
LSPSHVNQSVNHASGNASGLNHVTSPSHVTHSPVIQNPLSQVAHHPAHVTDPAVTSLPPV
TNANQTNTSPSVTNPMASPAVASPAVASPTTENGNGHVTSGVNGV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG