YALI0D22550g

Overview

Description similar to uniprot|Q6C6H3 Yarrowia lipolytica YALI0E09559g, F-box domain containing protein
Locus type CDS
Locus tag YALI0D22550g

Location

Species Yarrowia lipolytica Positions 2888896..2891094
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2199 (nuc.)
Previous locus YALI0D22520g Next locus YALI0D22561t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22550g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22550gYALI0D22550g_mRNA-001YALI0D22550g_CDS-001

Nucleotide sequence

 

>YALI0D22550g
ATGCCGACTCTTGACTCTACTGTGCAGTCGCCATCTTCAAGATATAAGACTGAAACGCCC
GTAGCCTATGAGAATGAACCAACAAGACTAGATACCTTGGACATGCTCCTCAACCTGCCA
GCTGAACAACTTTCCACCGTCTTCTCCTTCTGCGACCCCAGGTCTCTGGTAGCGTTGAGT
CTTGTATCTCCGTACCTGAGAGCAGCAGTCCAGTCGAATGCCATGCTTTACAAGGCAGCG
TTTGAGGAGGTCTTCTTTGCCCAGACGAAAGAAAGGTCTGCAGAGTACAAACCCACAATT
GAGCAACAACTGACTTTCGTTGCTTCTCTGGGAGACAAGGTCGATGTCGAAGCTGCGATA
GAAGAGTTGAGGGCGGAAAATGATTTAGAGTCGATTCTTCCGCCCTTCAGCGATCATTAC
GAGGTTCATAGCAACGCTTTGCTTGCGCCAGAGACCCAATTAGACAACTCCCTGTGCAAT
TTCACCAACCCAGCGACGCTTGACGGCGATACCATCACCTGGCTAGTGACGGAGGAGAAT
TGGATAACGGTCTATGCCTTGAGTTTGAGAGATGGGATTTTGAGAGTCAAGGGAAGGAGA
AGCCTGGATCAGAAGACCGAAGCTGGTGGAACTGCAGTCAACAACACGGAACGGCAGGTT
CAAATGGTGAGGTCGCTGTTGGGTGTTCAGTCTATGACAAGTGATACGGAGATTTATCAG
GAGGAATTGTGGTTGAAAAAAGTGAACGCAACAGTTTTAAATGATGCGGAGGCTTGTGAT
TCTGGATCGAGACACGCCATCTCGTGGATCATGTTGCCAATTGGATATTCTCTCCCTCCT
ATTGGTGTTCAACGACTTCAGATCCAAGTCAATTCCCGCTACAGCTATTGTAGATTGGAT
TCGGAAACACATTCAGCGTGGTTTCTCCTTGATTGGGAACGGGCCAAATCGTTTCTACTG
TTCCAGACAAAGCTCATGAGTGACCAGATAGCTCTTCATGTCTGTCAGTACACTGGATGT
GTGTTTTTCACCTCCAGATCGAGTCTGAGAGTTGTGAAGCTGTTTCCACGAGTTTCGAAT
CGTCAAGTCGCGTGGTACCATGTTGCCCAGACAAATAACTTACCCAAGTCGTATCTATCA
GACAAGTATGGAGTTGTGGTGAAGGAGGGAAGCGAAAGGACTTATCTAAAGCACAAGGGG
AGCATTCTACTGGTTGGTAGACACGAGGGAAAGACTCAATGTTGGAAATATAGTCGTCCC
TTCCTCACCAAGCTCGACCAGTTCGTCAGGAGACATTTCGTGTCGTGGAAGAACCAGTGT
GAGGACTGTCAGGAGTGGAAGCGGTGGAAGAGAGACTTGAGCGGCTATTTCTATCCGATA
AAGAAGAGGAGGAGAGATTGAGATGGAGGGGAAAATTGGACTGAAGACGCGCGCGCAGTT
CAGTTCCAGTTGGAGTGTCGTGAACAACTGGAGAAAGAAGAATCAAAGCAACTGACATTG
TCTTTGGAGTGTACTGCATGTACTTTACTGTACTTGTACTGTCCCGACTCTGTGCTACAG
TACCTGTAATGTTCAGTCAGTGAGTATGTGAAGTGGGTATTGTCCACACAAAGTCGAGAC
AAGTGGACAAGTCGAGATTCAATTCGAACTTCAATTCGAACTTCAAGTTGAGATTCAAAG
GCGACATTCCAGAACTCCTTGACGAACACCAATCCCTGCTAGTTGTTGCTTCAACCACTG
GTGTCTCTCATTCCATGGATGCTATTCATAATTGATCTCATTCCACGTTGTAGTGTCGCC
CGTTTCACTTTCACCTTCCCTCCTCCGGTGAGATTACTTGCAGTGTACTCCATTGGCCAT
GTTCACGGCATACAATTCATTTCGGCAGTCAACCACAGTTATATCTGGTTGCATAGATTA
ACACATTCGATTCGATATTGATTCATATTCTATGCCAAAATCAATATATAATACCCGTCC
GTACCTCGAAAGCTCGTTATCCAGTTAACTTCATCATGCAGCTCAAGACCCTTGCTATCG
TCTCTCTCTTCTCTCTGGCCGCTGCCCAGCAGGCTGCTCCTAGTCCCGCCACTACCATGG
CTTTCACCCCCGCCGACTCGGCCGAGAACCCCGAGGACATTCACCAACTCATGAAGAAGA
AGTGCCCTGACGAGAAGTGCCCCAAGCCCAAACATATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22550g_CDS-001

Protein length: 467 aa.
Product: Conserved hypothetical protein

>YALI0D22550g_CDS-001 MPTLDSTVQSPSSRYKTETPVAYENEPTRLDTLDMLLNLPAEQLSTVFSFCDPRSLVALS
LVSPYLRAAVQSNAMLYKAAFEEVFFAQTKERSAEYKPTIEQQLTFVASLGDKVDVEAAI
EELRAENDLESILPPFSDHYEVHSNALLAPETQLDNSLCNFTNPATLDGDTITWLVTEEN
WITVYALSLRDGILRVKGRRSLDQKTEAGGTAVNNTERQVQMVRSLLGVQSMTSDTEIYQ
EELWLKKVNATVLNDAEACDSGSRHAISWIMLPIGYSLPPIGVQRLQIQVNSRYSYCRLD
SETHSAWFLLDWERAKSFLLFQTKLMSDQIALHVCQYTGCVFFTSRSSLRVVKLFPRVSN
RQVAWYHVAQTNNLPKSYLSDKYGVVVKEGSERTYLKHKGSILLVGRHEGKTQCWKYSRP
FLTKLDQFVRRHFVSWKNQCEDCQEWKRWKRDLSGYFYPIKKRRRD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG