YALI0D22418g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D22418g

Location

Species Yarrowia lipolytica Positions 2855047..2856601
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1555 (nuc.)
Previous locus YALI0D22396g Next locus YALI0D22429r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22418g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22418gYALI0D22418g_mRNA-001YALI0D22418g_CDS-001

Nucleotide sequence

 

>YALI0D22418g
ATGTCGCCGAAGAAACTGCCGCTGGACAAGCTCTATCTGTACTCGGCACGTGACCAAGTC
GCTCTGTCACGTGACGAGGAGGATCGGCTGCGTCGGCTTGAGGGACAATATTTGCAGTCG
TACGATGCCGAGCGGGCCAAGCTTGAGAGCAAGTTGCAGGCCATCAATGAGGCCATGGCG
GAGGAGGAGAAGGAGGGGGAGGAGGAAGGAGGTGGAAAGGGCAAGTCCCAGGAGGAGACC
TTGTTGCGGCGCATTTTTGGCGGGGTTCTGGGTCAGATGGAGGAGGGAGAGGGAGAGAGA
GAGGCGAGGGTGGAGGGGGGGTTTGAGATTGAAGACGATGAGTATGAGGATCTCGGGGAT
GTTGGGCGTGGTGGGGGTGCAACAGAAGCAACTACTTCTATTTCTCCAGAGGATACTCCT
GGGCCACAATCCGAATCCCATTTTGATCCTGGAGAGGGCAGCAGCGGTTTAGCTGGGTCT
GCTGGGTCAGGAGAAACCAATCATCTGGCGGAATCTGACTCAGAGGACGAGTATGTCCGC
CAGCAACGTGAAAACCGCCGTCTTCTGGCCGAGAGACAGGCGCGGGAAGCCGAGCGAGCC
GAGGCTGGAGAGACCGAGACCCAGACGGCTAAACAGAAGATTGTGGGTAAGAAAAAGGGC
AAGTCGCTGGCCCGCAAGGAGCAGAAAAAGGCGTACCATGAGTACACGCGGATGGTGTCG
GATGCGCGAAAGCGTGAGGAGCAGGAGTGGATGGAGGAATACAAGGAGGTTCTGGCGCTA
CAAAAGTGGGTCCGAATCCAAAAAGAGGCGCGGGCAAGCTTCGAACTCATGGTGGATAGG
CTCTATGAGTCGTTCCTGGCTGAATTGGAGGTCCAGAGTAGACACATCTGGCTCGCCCAT
CAACAGTCGCAGCTGGAGGTGTCTGATGGAGGATACCTGTATCTTCCCGAGGGCGGAGAT
GAGATTGACCAAGGTGGAGAGAACGTGGTGACTGCCGACGGCCGATTCTGGGTGACACTG
ACCCCCCATGAGAGACAGGTAGTGCTGGAGTTCATTAGAGACAAGGGCCGGGTTGAGTTG
GACGAGCTGGCTGAGTTGGTGCGAGAGTTGAAGACCCGAGAGTGATCCATATTGAGAGCG
CTTATAACGAGAGTGATCCATATTGAGAGCGCTTATAACCAGAGCGCAGCCATAACTCGA
GCTGCGCTCTCGTTATGGAAAAAGAGTGTTCATTGTTCGGCAGAGCGGATCTCCAGGGTG
TTGATGTCAAAGTCACCACGTACCGTGTCACCCTCGTGTCACCCTCATGCCACCCTCGTG
CCACCCCCTTCACCCGGTGCAGACTAGCAGAAGAGCCCAGCCTTCCAATCAACAATCTCC
TATGGCAACCTCATCAAGGCGAATGCAATCTACAGACCAGAGAAGCGACATTGCAGTCTC
CTAGTCTCGATCAGTTGCTGTCTGTCTATAGATGTTCCTCGAAACAAAGTACTCAGACTC
GAGTGATAGTTGAATATATCATCTAATGTGGACTATACATTTCGTGCCACAAGCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22418g_CDS-001

Protein length: 375 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D22418g_CDS-001 MSPKKLPLDKLYLYSARDQVALSRDEEDRLRRLEGQYLQSYDAERAKLESKLQAINEAMA
EEEKEGEEEGGGKGKSQEETLLRRIFGGVLGQMEEGEGEREARVEGGFEIEDDEYEDLGD
VGRGGGATEATTSISPEDTPGPQSESHFDPGEGSSGLAGSAGSGETNHLAESDSEDEYVR
QQRENRRLLAERQAREAERAEAGETETQTAKQKIVGKKKGKSLARKEQKKAYHEYTRMVS
DARKREEQEWMEEYKEVLALQKWVRIQKEARASFELMVDRLYESFLAELEVQSRHIWLAH
QQSQLEVSDGGYLYLPEGGDEIDQGGENVVTADGRFWVTLTPHERQVVLEFIRDKGRVEL
DELAELVRELKTRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG