YALI0D22220g

Overview

Description similar to uniprot|A3LQU5 Scheffersomyces stipitis hypothetical protein PICST_56695
Locus type CDS
Locus tag YALI0D22220g

Location

Species Yarrowia lipolytica Positions 2819753..2820732
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 980 (nuc.)
Previous locus YALI0D22176r Next locus YALI0D22242g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22220g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22220gYALI0D22220g_mRNA-001YALI0D22220g_CDS-001

Nucleotide sequence

 

>YALI0D22220g
ATGGATTCGTTTGCACAGAAAAAAGCATATATTCTGGAGCAGATTTCGCTCAACAGCGAA
GACAACCCGGACGACTCGCCCAAGGGCACGATCGACGAGTTTCTGAAGCCGTTGATTGCA
ACCATCAACGGTCTGGACGACTTTGTCACCACCAGCAGCTGTTCTGGACGGGTGTCTGTG
TTTCTGGAGGGCGAGAAGGGCGTTGAGGAGGGCGGGAAGGTTACTGGAAAGGGCGGAGGC
AAGTGGCTTTTTGTGTCGCATGATCCTAAGGAGATTGAGGGGTGGGAGAAGAAGGTGTTT
GGACAGGACGACAAGATGGCCGAGGAGTGGCTGGGCCACGTGGCACCCCAGACCAGTCTG
ATTCTGTTTAAGTATGAGGCTATGATTTTGCATGTCCAATGTCGGTCTTTGTTGGCCGCT
CAGGCTCTTTATTCGACGGCTATGGGCTGTGGATTCAGAGAAAGCGGGATCGGTAGTAAC
AACAACGTGGCGATCCGCATCTCGCTCAACATTGGATGTCCTATCGGCTACGGCGAGGGG
GACAACTTGCATTTGCTGGTACCCACAAGTTACCTGCAACTTCTTACTCAGCAGAGCCGT
ACACTGTTTACTGAGAACTTCAGACGCATGGATATGCTGCATAGGGCCATTGAGGGACTC
CAGATAAAGAAGGAAACCGTGGAGGAAACGAAGGAGCAGCGGGCACAGCGCAAGCGACAA
GAAGGGCTGCGGCGACAGAGGGAAAAGATGGAGGCCCAACGGGCCGACAGTACTAACGCC
CATCTGCAGTCCTAGTCAGTGTCCGTAGAGTTCATTACTGGGGGGGTATTTAATTATTAC
AGGGCGAAATCAAGTTCGATGAATGGGGAATTGGAAATGGGAGACTTTGGTTGGATTTGG
TTCTTGTGAAGTTGGAGGGTACTAGTTTGAACTATTTGAACCGCTGCTATAGCCGTATTA
TGGAGACAACAGTATAGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22220g_CDS-001

Protein length: 265 aa.
Product: Conserved hypothetical protein

>YALI0D22220g_CDS-001 MDSFAQKKAYILEQISLNSEDNPDDSPKGTIDEFLKPLIATINGLDDFVTTSSCSGRVSV
FLEGEKGVEEGGKVTGKGGGKWLFVSHDPKEIEGWEKKVFGQDDKMAEEWLGHVAPQTSL
ILFKYEAMILHVQCRSLLAAQALYSTAMGCGFRESGIGSNNNVAIRISLNIGCPIGYGEG
DNLHLLVPTSYLQLLTQQSRTLFTENFRRMDMLHRAIEGLQIKKETVEETKEQRAQRKRQ
EGLRRQREKMEAQRADSTNAHLQS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG