YALI0D22110g

Overview

Description weakly similar to uniprot|O59805 Schizosaccharomyces pombe Acetamidase
Locus type CDS
Locus tag YALI0D22110g

Location

Species Yarrowia lipolytica Positions 2805618..2807468
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1851 (nuc.)
Previous locus YALI0D22088g Next locus YALI0D22121r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22110g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22110gYALI0D22110g_mRNA-001YALI0D22110g_CDS-001

Nucleotide sequence

 

>YALI0D22110g
ATGACAGATAAGACCCCGCTCGGGACTGCTGATCACTCAGAGACTGAGTTTGAACACGCA
AAAAAAATCTACGAGGAACGACTTGAATCCAGCATTCTGCGGGCCTATGACCTTTTCCCT
GCGCCAAAAGACACGCCAGAATGGCAAGTCCCAGATCAACTTCCCCTGGACGTGATTCCT
CTGTTCCAAAGCCTGGTGGCACCTAGCGACATGGAAATTGTGTCCCTCGACGGCATTGAC
CTGATAACTAAGCTCAAAGATGGATCATTGAACTGTGTTCATGTCATTGGATGCTTTATT
CGAGCAGCCATCACGGCCCACAAACTCGTCAATTGTCTCACCGAGGTGTTACCAGACCTC
GCATTGAAGACAGCCAAACAATTGGACGCGGAACGCGACTCTCACGAAAAGTACGCGTTG
TATGGACTTCCTATCTCTTTGAAGGAACTCATTTCCCTGTCCGGATTGTCGTGCCATGCC
CAGAACTCGTACCACATTGACCGGGTGGTGTCTCGTGACTCGACACTAGTCTCTTGTCTC
TATTCTTCAGGTGCTATTCCCTATGTGCGGACCAATGGTCCTCAGATTCTCATGTCTGGT
GAGTCTCATTCTCCTCTACATGGGTTCACTTTGAACCCTCACAACACGGTCTTGTCTTCT
GGAGGCAGTTCTTCCGGTGAGGGAGCTTTGATTTCGATCGGTGTTTCAAAGCTCGGACTC
GGAACTGATATTGGCGGCAGTGTTCGCGAGCCCGCTTCGTTCTGCGGCATCTACTCCCTT
CGCCCCACATTTGGACGGTTATCAGAGACTGGTGTGGACATGATGATGGCTGGAAATGAG
TCGATTAGATCAGTCTGCGGCCCCATGACCTCAGATCTGAGACTTATTGAAGCCTACATG
AAGGACATGGGCTCCAAGGAGGTGTGGAGAATCGATCCCTCGGTCGACAGATGGGTGTGG
AGAACTCTTGACTACGGTCACATGAAGAAGCTACGAGTCGGCTACTGTATTGACGACGGC
TTTGTCAAGGCCTTCCCGCCCATTCAAAAGGGTATTCTCAAGCTGGTTGAGCAGCTCAAG
GGATCTGCGTTTGAAGGAATGGAGGTAGAGCTCACCCTCTACCATCCCCCTAGCATTGCC
ACTGCCAACAAGCTGCTCGATGCCTTTTACTTCCCCGACGGATGTGAGCGGATCAAGAAC
CACTTCTACCGTTTCAAGGAGCCCATCACTCCCCAGACCCAGGACATTCTTGACGGCGCA
AGGGGGTACACTTTTGAGGAGCTGTGGAAGATGCATCAACAAAGAGACGAGTTTCGAATG
GACTTCCACCAGGATTTCACTTCCAAGTTCGACGTGGTCATCTACCCTGTCAATAACTCC
GTCGCTCCTGTTTTCCACACCTCCAAAAACCTCATGTATTGCGGAATCTGGAACCTCATG
GACTACCCGGCTGTGGTGGTTCCTACAGGCGCCAAAGTATGCGATTTCAGCTACGAGAAG
ACGACTGAGTTCAGAAGCGAGCTGGAAAAGCTGTGCTGGAAGCCCTGGACGGAAAATGGT
GCGGACATCTACAAAAATGCCCCTGTTTGTGTCCAGATTGTTGCTCCTCGGTGGGAGGAC
GAGTTGGCTGTCAACGTCGCCAAGTGGGTGGACCACAAGGTGAACAAAAAGCACTGGAGT
GAGTAAAAGAGTTGTTCGTCGAATTTCCTGACTACCTCAGCACGCTAACTACTTGGCGTA
CAGTAATTGTCGCTATTATACTGCTGACAAAGTGCTTCAAACGCACTGGGTGTACTCGAG
TATTGTACTTGTAACAAGAATTGGAAGTAAAATACACAAGACTGTAGTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22110g_CDS-001

Protein length: 562 aa.
Product: Conserved hypothetical protein

>YALI0D22110g_CDS-001 MTDKTPLGTADHSETEFEHAKKIYEERLESSILRAYDLFPAPKDTPEWQVPDQLPLDVIP
LFQSLVAPSDMEIVSLDGIDLITKLKDGSLNCVHVIGCFIRAAITAHKLVNCLTEVLPDL
ALKTAKQLDAERDSHEKYALYGLPISLKELISLSGLSCHAQNSYHIDRVVSRDSTLVSCL
YSSGAIPYVRTNGPQILMSGESHSPLHGFTLNPHNTVLSSGGSSSGEGALISIGVSKLGL
GTDIGGSVREPASFCGIYSLRPTFGRLSETGVDMMMAGNESIRSVCGPMTSDLRLIEAYM
KDMGSKEVWRIDPSVDRWVWRTLDYGHMKKLRVGYCIDDGFVKAFPPIQKGILKLVEQLK
GSAFEGMEVELTLYHPPSIATANKLLDAFYFPDGCERIKNHFYRFKEPITPQTQDILDGA
RGYTFEELWKMHQQRDEFRMDFHQDFTSKFDVVIYPVNNSVAPVFHTSKNLMYCGIWNLM
DYPAVVVPTGAKVCDFSYEKTTEFRSELEKLCWKPWTENGADIYKNAPVCVQIVAPRWED
ELAVNVAKWVDHKVNKKHWSE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG