YALI0D21802g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D21802g

Location

Species Yarrowia lipolytica Positions 2763498..2767999
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4502 (nuc.)
Previous locus YALI0D21769g Next locus YALI0D21846t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21802g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21802gYALI0D21802g_mRNA-001YALI0D21802g_CDS-001

Nucleotide sequence

 

>YALI0D21802g
ATGAAATCGCTGCTCCATCGCCGCAGTCAGTCGGCCGGCGGGTCCGAGTCGCCCAAGTCG
AAGAGTGGCTCGGTCACGCCCTCTTCTCCGGCCATGCTCATGTCTCCAGGCAGCAGATCA
CCCGACAAGAGTCCGCCCAAGTCCCCCGGCAGGCTCTCCATGAGCTCAGTGTTGCGTCGA
ATGTCCACCAGCAGTCCTCCAAAGAGCCCCGTCAAGAGCTCGAGTCCCCAGCGATCGCCA
ACTAAGAGCGGTAGTCCGTTCGGCTCGGTGTTCAGCAGCAATGTGGTCAAGAAGGCTCTG
GCCAACCACTACCCGACCACGCCACGAATCGAAGAAAAGGGTCACAGAAAGACGCAATCT
GCCGGTCAACAGTACTCTTCGATGATCATTGACGCAGAAAAGCAACAGAAACCGCAGACA
CACACCCGAACGCCGATTCTGCCAGAGAGATATCCTGTCACGCCGGTGATGCAGGCTAGC
ACGCCAAAGACACCAAAGACAGAGCCGCAGAGGAGTAAGTACACGGAAGTGACTGCCAGA
AGATCAGGGGCGGATAACAAGCAGAAGAACCAAATACTTGTGACCGGGACTCGAATAGAG
AGCGGTCTCCATACGGCTTCAACCTAGTGAAGACGTGTGATCTCCGACTCCATGTTGCTG
TTGACAGTACTTGTTATGTGCAGCGAACGCCTTGAATTGCTACGAGTCCCTGATCCAACA
TTTGACAGCTACAATTGAAGATCTACAGGTCCTACGGAACCATTCCCATGATGTAGATCA
CTCAGTTGGACGTTCGCTCTCGGTAAAAGCCTACAACAATGATATACTAACACAGAAACA
TACGGAGACACCTTCCCCCAATTGTCCCCGCAGACCAGTAAACCTGCTTTGAGTAAGTAT
CAAGAAATGAGATGGAGAGGGTCAGAGGGGACCTATAAGCAACATGGTCAAGATGTCTGG
AAGGCTCAAGGGAGCAATATTGAGCACCAACAGCATTGCACTACCAATCTCAGTCGCTGT
TGCTATTCACCGCCCAAGGTTCTTATGTTATTGTACCTGTTCAATGGATAGAACCATTGT
GGCCACCAATTGGTCGCTTCTGTCAATCACTTCCGTCTTGCAACTAACACAGAATCCCCC
TCTTATAATCGCCACTCGTATCACCCCAACGCCATGTCAGACTTAGACCCGCTACAAAAT
CCCACCACGAGCATCAATCTTAAACAAACCAAGTCCCACACCTCGCTCAATAATCTCAGC
CAGACAAAGTCATACACTCCTAATCTGAGCAGCACGGGCACTCCCAACCTCAGCAAAACA
TCCTCGCATCAAGTTCGTCCTCGGCGGCTGTCTGCTGATCTTAGACGTTCCTTCGATGTC
AGACGAGCTGACTTCACCGCTGCGCTGGAAGAGAAGAAGTCTTCGCTTTCTCCAAATCTG
AAGAAACTAAACCCCATCAACTTGATTAAAAGAAGGAGCAGCAAGGACGATTTCATCAAC
ATTGCCGATGTATACGAAGACGCTGGAATCTACGAATCTCGCACTTCCAGGGAATATTCA
GCACGAGACTTTTCTTCAAGAGATAACGTCTTTACGCCTACTTTCACACCCACGTCAAGC
CACGACGGCTTCGACAACTCTCGAGAACTCCATCCCACGCCGGTGTCACATGATATCATC
AGCTCTTCTCGTGACCCCGAAACTGGTGTCATTTACGCAACCCGAAAGTGCGAATGGGGA
ACCAGTCCTGGAAGTTCCAAGACTTCGGTGGTGATGGAGTCTCCAGTTATCACAGCTACA
GAGCCTCAAGTGACTCGCAAACATACGAAATCAAAGTCTGCAGTCATCACTAATCCACTG
GAGATTCCTGATCAGCCCGTCGAGTCGCTGCGAGTGGTTAAAAAGTCGTCTGGCGTGGGT
CTCAACATTCTGATGGGAGGAGACATGTCCCGAGACTCTCTTGTACGCGATTCTCCTTCT
TCTCGTGACTCCCCTAGTCGTGCTTCGTTCACGTTTCCCTCTCGCGACTCTCCCTCGCAT
GTATCATTGGCCCGAGATTCTCCTTCTAGGGCCTCGTTTTCCAACGACTCTCCGTCTGTT
ATTCAGCCTCGGAGTTCTTTCTCACGAGAACTCCCTTCTGTCCCTTCCAGACGCGACAGC
AAGGTTGCTTCTCGACGCCATTCGGCCATTGGAATAGACACAAACACATGGGAAGTTCCC
CCTCGTGACTCGCGACGAAACAGTAGAGTTCTCAGTGAGATTATTGCGGAGTCAGACCTC
ACAGCTATCTCCGACGCTGCTGAATCAGCTAAGATAGCAGAGGCAACGAGGATTGCCGAG
GCTCGAGCGGCAGCAGACACAAAAGCTGCTGAATCAGCGAGTGAAGCGGTGAAAGCTCAG
TCAGCTAATGTTGATCCAAGTCCTTCTATCGACTTCGAGTCTCATGATACACTGTCTCAT
GACACACTTTCTCGAGGACAAAACTCGTTGCGTTCAAGTAACACTGGCCACACTTCTTTT
GAGCAGGAACTCGAAGGTGAGCACGTGGTTGAACACATAACTTCGGGTAGCGCGATCCCT
GATAATGTGTCCATCTCCCAATACACGAAGCAGCTAATGGCTCAGGATCGCGACAACTCA
TTTGGTGGGCTTTTGGAAGACGATTCCGACTCTGCCTTTTCTTTTGAGGACGACGATTTT
GGAAGAAACTCTTCTGTGCGTCTACACAAGAAACCTGAGCGGTTTACGAGCCATGACTTG
AGTGATGGTGAAGAAGAGTATGATGACTATGACGGGTACGATGACGATATGTACGATGAC
GAAGGCATTGAAGACGATGCTCATTTGTACGGAGGCAATGCTTTCCTGGACCAGTCATCG
CCTAAAGACGAGGTTCCTCCTGGAGATATTCTTCCCAGCAGTCTTACCAACCATGGATCT
AGAATCTCACGCGGAAAGAGTCATGGACGAGGTTTGAGTGGTAGCAGACGTTCTAGCTAC
TCGAAGGACAACTCTAGTGGAATTACTCGTTCTAGACGTGCTTCCGTTGAACAGGGTACC
GACTCAGCCCATGATTCTCCTGCTGGCATCGCTGCTTCCTCTGTCACGTCCCCTGCTAAC
CACGAGCGTCATAATAGTCACGGTAGTATTGGTGGACGAAGCCACGGAAGAAAACACAGC
AAGCGATTAGCAAGTTACCACAGTAAGGATGATTCTACCTCTACTACTGCTGACTCAATT
GGACCTGTTGCTGTGACTGCTGATGATCCTGTTTTCCAGCGTCAAAAGTTACTGTCCCAG
CAGTTGTCTCCTGCCCAGTTCAAGTTCCCCCCCGACTCAAGTGAGACTCTTGAACTTGAT
TTTTCAGGCGAAAAGTCAAGAGATGGTTGCCATGCTCGTGATCTGAGTAGTAGGTCACTT
GGCTCGATTACTTCTCCTGATGTCAACCAGAACGCAGTGTCAACTTCTTCTCCGTCTGTA
TCTCACTCCCGCCAGTCGTCGCGTGACAAGAGACGTTCGTACAAGTTCCCTCCTGCTCAG
GAAGAGGATTTTTCGTTTGAGTCTGCCCACGACTCTTCGTTAAACCATACCATCACCGAA
CAGGACTACGAGGACGACGAACACGACTCTACAGCGTTTGCCTACCAGGAAGTTGAAGAT
GCTCTTTCTGAGATTGAGTCTCTCACCCAGTCTGGATGCAGTTCTCCCATGAGATCCAGG
TTTGAGATTCCGTCTCTTGGAGAAACCCTAGGCCATGTGCGAAACCTGTCCAATCCGAGC
TACGTGGGAAGCCCTGGCCATGCTCGCAACCTCAGTCACGTGAGCAGCCCCAGTCACGTA
CGAAATCTGAGTCAATTCAGCAACCCCAATTCTACTGGTCATATTTCCAGTCCCAGTTTC
GGTCAGACAGGCCACATTCGGTCGGTTTCCGGCACGCAGGCGATTCAGGAACCGCTTGAG
ATCGACACAGGGTTTACAGATTATGATCAGTACGGATTTGGGTACCCCGAGGGCGATTTT
GAAGGGGGAGGATACTCCGACGAGTACTACGATGACCTCCTGGATGAAGCTAATGCGGTT
TCGGAAATCTACTACGATGAAGAAGATCCAGTGAGAAGTGATAGAGGATACAGTAGTCGT
CTGGAGCGGTCCCACAGCAACAGAAAGCTGCCTCGAAAGGTGATTCACGTCACTGAACCC
AGCAATAATGTGGTTGAGTCTCGTGAAGGAACAACCACCCTGTTTGGACTTATTAATGAT
GAAGCCGAGGAGGCGAGAAGTATCGTCACCACTCCTGTTAACCAGCAGGGTCCTTTTGAT
CCGATATCTGGACTTCCCATTCCTGGGTATGTTGAATTGACTCCTATTAGTGAGCGGTCA
TATGATGGAGATTCTCCTTATAGAAGGTAGATGAAGAGATATTTATTAATGCATTGATTT
AATACCCTCGAGCATATAGTCAATGTCCACCACAGTAATACTCAATAAATAAATTGTCTA
TT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21802g_CDS-001

Protein length: 1283 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D21802g_CDS-001 MKSLLHRRSQSAGGSESPKSKSGSVTPSSPAMLMSPGSRSPDKSPPKSPGRLSMSSVLRR
MSTSSPPKSPVKSSSPQRSPTKSGSPFGSVFSSNVVKKALANHYPTTPRIEEKGHRKTQS
AGQQYSSMIIDAEKQQKPQTHTRTPILPERYPVTPVMQASTPKTPKTEPQRKTYGDTFPQ
LSPQTSKPALKSPSYNRHSYHPNAMSDLDPLQNPTTSINLKQTKSHTSLNNLSQTKSYTP
NLSSTGTPNLSKTSSHQVRPRRLSADLRRSFDVRRADFTAALEEKKSSLSPNLKKLNPIN
LIKRRSSKDDFINIADVYEDAGIYESRTSREYSARDFSSRDNVFTPTFTPTSSHDGFDNS
RELHPTPVSHDIISSSRDPETGVIYATRKCEWGTSPGSSKTSVVMESPVITATEPQVTRK
HTKSKSAVITNPLEIPDQPVESLRVVKKSSGVGLNILMGGDMSRDSLVRDSPSSRDSPSR
ASFTFPSRDSPSHVSLARDSPSRASFSNDSPSVIQPRSSFSRELPSVPSRRDSKVASRRH
SAIGIDTNTWEVPPRDSRRNSRVLSEIIAESDLTAISDAAESAKIAEATRIAEARAAADT
KAAESASEAVKAQSANVDPSPSIDFESHDTLSHDTLSRGQNSLRSSNTGHTSFEQELEGE
HVVEHITSGSAIPDNVSISQYTKQLMAQDRDNSFGGLLEDDSDSAFSFEDDDFGRNSSVR
LHKKPERFTSHDLSDGEEEYDDYDGYDDDMYDDEGIEDDAHLYGGNAFLDQSSPKDEVPP
GDILPSSLTNHGSRISRGKSHGRGLSGSRRSSYSKDNSSGITRSRRASVEQGTDSAHDSP
AGIAASSVTSPANHERHNSHGSIGGRSHGRKHSKRLASYHSKDDSTSTTADSIGPVAVTA
DDPVFQRQKLLSQQLSPAQFKFPPDSSETLELDFSGEKSRDGCHARDLSSRSLGSITSPD
VNQNAVSTSSPSVSHSRQSSRDKRRSYKFPPAQEEDFSFESAHDSSLNHTITEQDYEDDE
HDSTAFAYQEVEDALSEIESLTQSGCSSPMRSRFEIPSLGETLGHVRNLSNPSYVGSPGH
ARNLSHVSSPSHVRNLSQFSNPNSTGHISSPSFGQTGHIRSVSGTQAIQEPLEIDTGFTD
YDQYGFGYPEGDFEGGGYSDEYYDDLLDEANAVSEIYYDEEDPVRSDRGYSSRLERSHSN
RKLPRKVIHVTEPSNNVVESREGTTTLFGLINDEAEEARSIVTTPVNQQGPFDPISGLPI
PGYVELTPISERSYDGDSPYRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG