YALI0D21406g

Overview

Description some similarities with uniprot|K0KUC5 Wickerhamomyces ciferrii BN7_4361 Kelch-like protein 20
Locus type CDS
Locus tag YALI0D21406g

Location

Species Yarrowia lipolytica Positions 2711674..2712760
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1087 (nuc.)
Previous locus YALI0D21384g Next locus YALI0D21428g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21406g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21406gYALI0D21406g_mRNA-001YALI0D21406g_CDS-001

Nucleotide sequence

 

>YALI0D21406g
ATGCCTCTGACCTTGGAAGATATCCGCAAGGTCTACGAGAGAATATATTTCGATGTTGGC
GAAACCAAAAGACTGCACTTATTTCTCGACCTCAAGCTCACCAGTTATTTGTACCATGCG
GTGGCCCTGGAAGATACCAAGACGGAGGAGCTGATTGACTACCCCGACGCTCGGTTGAGC
GAGCAGGAGCAGCTGGTGGAGTACCATGAGTGCGAGGGAGATGCATTGTTGGTCAAGTTT
CCCACCGAGAACCGATTTCTGACCCAAGAGAACGAAAAGGAGCTCAACAGTGAGAATATC
TCCGACGCTGTGTTTGAGTGTCTGAAGACAAGGCTTCGGAAGCGAGAACCGCAACTGACG
GCGGCTGCCAAGATCAGACGGGGTGGCGACTTCGATTTCCACATCATTTCAAAAGAGGGA
ACAGCAATAGGAGTGCATTCTGTGGTTCTATCTGCTGTCTGGCCCTTCTTCAAGGCTCTG
ATGGATTCAAACATGCAGGAGACGGCCAACAGAAGACTGCTGTTATCCTATCCGCACGAA
TGGGTGGAAGCATTGGTCTCGTACTTGTACGAGGAAGAGCAGCAAATGGGTTTCGAGCTG
GCCTCGGGCGTTTTGGTGCTGTCAAGTGTCTACGATCTTCCCGAGTTGACCGCCATGGCC
AGAACGCGGGTGCTCAAGGAGCCTCTGGACACTGTCAAGAGTCTTCTAGGATGGAGAAAT
GCATACGAGGCCCGCTGTGAAGAGGTGCAATTGCATATGGCGCGGTTTTTGGCCGGTCAC
AGACACGAACTACACAGCAGCGGGGCTTTGGAGGAGCTGTCTCTGGAGGAAGTTGATCAG
CTGGAGGAGGATTTGAGGGTGGAAGAGGAGACATTGAGGGCTTAAAAGTGTTTTAAAACT
TGTCTCTTTATAACATAGCTGTCTTATAGTAGCGAGAGACTTTACAACTGCTGTAGTTAC
TGGTACTCGTACTGTATGTAGCTCTAGCTAGCTCCTGCTAGTTGTTAGGTTTTGTTAGCT
TTGTTAGGTCTTGTTAGCTTTGTTTCTTGATCAGCTTTACAAAAACGAAACATTAACAAT
CCACTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21406g_CDS-001

Protein length: 295 aa.
Product: Conserved hypothetical protein

>YALI0D21406g_CDS-001 MPLTLEDIRKVYERIYFDVGETKRLHLFLDLKLTSYLYHAVALEDTKTEELIDYPDARLS
EQEQLVEYHECEGDALLVKFPTENRFLTQENEKELNSENISDAVFECLKTRLRKREPQLT
AAAKIRRGGDFDFHIISKEGTAIGVHSVVLSAVWPFFKALMDSNMQETANRRLLLSYPHE
WVEALVSYLYEEEQQMGFELASGVLVLSSVYDLPELTAMARTRVLKEPLDTVKSLLGWRN
AYEARCEEVQLHMARFLAGHRHELHSSGALEELSLEEVDQLEEDLRVEEETLRA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG