YALI0D20834g

Overview

Description similar to uniprot|W9YG26 Capronia epimyces hypothetical protein A1O3_00026
Locus type CDS
Locus tag YALI0D20834g

Location

Species Yarrowia lipolytica Positions 2641632..2643282
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1651 (nuc.)
Previous locus YALI0D20812t Next locus YALI0D20845r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20834g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20834gYALI0D20834g_mRNA-001YALI0D20834g_CDS-001

Nucleotide sequence

 

>YALI0D20834g
ATGCTAGATTACGAAGCAGTTCCGGGCTCAATCATCCTGGTTGACCAGGACCAGGAGATT
GTGGTGTCGCCCATCCCGTCGTCAGACCCCGATGACCCGCTGAATTGGTCGCGAAACAGA
AAACTGCTCTCCATGTTCTGTATGGTGGTCTACATGGTGGCCATTGTCGTGCCGTCCAAC
TCGCTGTACTCCATTTTCTCGGTGCTCACCGAAGAAAGTGGACAGACCCTGGACGAGCTC
AACCAGGGAACAGGCTACATGTTTCTGTTTTTTGGCCTCGGTTGTCTCATTTGCCAGCCT
CTGGGCCAGCAGTACGGTAAGCGGCCCATCTATCTGCTCTCCGTGCTCGGCACTCTCGCC
GTCCAGCTCTGGAGTCCCTACGCCAAGTCCCAGGGCGCCTGGATCGGATCTCGTATCCTT
CAGGGAGCCCTGGGAGCGCCCATGGAAACCATGTGCGAAATCACAATCTCCGACGTCTTC
TTCGAGCACGAACGAGGCCGATGGGTCGGAGTCTACGCCTTTGCGCTCATGTTCTCGTCC
TACATTGCTCCTCTTGTTGCAGGCTTCATCGCAGAGGGCATGAACTGGAAGTGGGTCTTC
TACTGGGGCTCCATCTTCAACGGAGTGTGTCTGGTTTTCCTCTTCTTTTTCTTCGAGGAG
ACCAACTACGTGCGAGAACACGTTGCCCAACCCGTCCCCAAGGAGGGATCGGTTCTGGAG
GGCTCTTCTGGATCTGGAGACCCCGAAAAAATCGACGACTACTCCGAAGGCCGATCCGAA
TCGTCTCTTGAACACCAGCAGAAGCCCATGAAGACCTATCGACAGAAACTCGCACTGTGG
GACAAACCCCGAAAGAATATGCTGTGGGAGATGTTCAAGCGTCCCTTCATCATCTTCTTC
AAGTTCCCTCCCGTGGTCTACGCCGGGTTCCTCTACGGCTCCGGTATCATCTTCTTCAAC
ATTCTGAACGCCTCGGCCTCCATGATTCTGTCAGCTCCTCCCTATAACTTCAAGCCCTCC
ATGGTCGGTCTGTGTTACGTGTCGCCCATCATCGTCACTTTTATCACATCCTGGTACTCC
GGTTACCTGTCCGATCTGCTACGTATCAAGCTGGCCAAGCGAAACGGCGGTCTGTCAGAG
CCCGAACATCGACTGTGGATCATTCTCATCCACATTATTCTCAACCCGGCCATGCTGGTG
CTGTGGGGAGTCGGCGCATACAACGGAATCCACTGGATCGGCCCCGTCATCGGCATGGGC
ATCATCGGAGGTCTGGCCACCATCCCGGCCGTCTCCTCCGTCAACTACGCCCTCGACTGC
TACAGAGAAATCGGCTCCGACTCGCTAGTGACGCTCATTGTCATCCGAAATTGCATGTCC
TTCGGAATCGGCTACGGAATCACGCCGTGGATCACCCGGGAGGGTCTCAAAAACGCATTT
GGAGAGGCCGCGGGAGTCTCTGCCGCCTGCATGGGCACCTTCTTCATTGTGCTTGTGGTT
GGCAAGAGAATGAGAAAATGGACCAAGAAGGACTACTGGAACTTTGTGCAGAAGTCCATC
GACAACGGAATGGTCCATTAGATAAGAGATATATATATAGAGAGAGGTACTTGTGGGGGA
TTTGCATTGAATATATTGTTTGAATAATTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20834g_CDS-001

Protein length: 527 aa.
Product: Conserved hypothetical protein

>YALI0D20834g_CDS-001 MLDYEAVPGSIILVDQDQEIVVSPIPSSDPDDPLNWSRNRKLLSMFCMVVYMVAIVVPSN
SLYSIFSVLTEESGQTLDELNQGTGYMFLFFGLGCLICQPLGQQYGKRPIYLLSVLGTLA
VQLWSPYAKSQGAWIGSRILQGALGAPMETMCEITISDVFFEHERGRWVGVYAFALMFSS
YIAPLVAGFIAEGMNWKWVFYWGSIFNGVCLVFLFFFFEETNYVREHVAQPVPKEGSVLE
GSSGSGDPEKIDDYSEGRSESSLEHQQKPMKTYRQKLALWDKPRKNMLWEMFKRPFIIFF
KFPPVVYAGFLYGSGIIFFNILNASASMILSAPPYNFKPSMVGLCYVSPIIVTFITSWYS
GYLSDLLRIKLAKRNGGLSEPEHRLWIILIHIILNPAMLVLWGVGAYNGIHWIGPVIGMG
IIGGLATIPAVSSVNYALDCYREIGSDSLVTLIVIRNCMSFGIGYGITPWITREGLKNAF
GEAAGVSAACMGTFFIVLVVGKRMRKWTKKDYWNFVQKSIDNGMVH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG