YALI0D20702g

Overview

Description weakly similar to uniprot|Q06488 Saccharomyces cerevisiae YLR357W (ohnolog of YGR056W) RSC2 member of RSC complex, which remodels the structure of chromatin
Locus type CDS
Locus tag YALI0D20702g

Location

Species Yarrowia lipolytica Positions 2628700..2631142
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2443 (nuc.)
Previous locus YALI0D20680g Next locus YALI0D20724g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20702g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20702gYALI0D20702g_mRNA-001YALI0D20702g_CDS-001

Nucleotide sequence

 

>YALI0D20702g
ATGAATCAATCAATCGCGGACGCGATCGAAACGGCCCGGCCCGCGGTGATGAAGGCCGCC
GCGGCCAACGCGCCCATTTCGGACCTGATTTCGCCGCTGTTTGACGGCATCTACACGATC
GACAACGACATTGACAACAACAAGGTGTTTGAGGTGTTCCACTCGTTGCCGGACCGAAGT
CTCACAACCTACTACAAGGTCATCAAGCGGCCTCTGTCGCTGACACAGATCAAGCGGTCG
ATGCCGCGGTACCGAAACGTGCAGAACTTCATTCACGACCTCGCCCAGATTACCTACAAT
GCTCGGCTGTTCAACATGAAGGGTTCCGGAATCTACAACGATGCAGTGTTTCTGGACGGC
TACCTGAACAAGGCCATTGCGGTACTTCGAGAGACCAACAAGTTTTCCAACGATGACCTC
ACCTATCCTGTTATTGGTCCTCTTCCTGAGGGTTCCGATGTGGAGATGGAGTTTGGGTCC
GATTCTTCCGAGGATGACTTGAGTGACGACTCGGACGATGACGACGTCGATGGACGACGG
AAATCGAGACGAAAGTCTGTGCGAACACGAAAGAAGATGGACTCGGACTCGCAGCGAAGC
CGTATGGATGACATGCCCCGAAAGCGAGGCCGGCCACCTATCGTTGATAAACCGCACGAA
TACCGAATCAAGGCCATCTTACGGGGCGTTCGAAAGGCCCGTGACGAACAGGGACTGGTG
CGGTCATTCCCTTTCGAAAAGCTGCCTGAAAAGAGAGACTACCCGGAGTACTATCAGGAG
ATTGCCAAGCCCATCGCTCTGGACAACATCAAGAAGAACATCAAGCGACGCAAGTACGAC
ACTGTGGAGGCGTTTCTCAATGATATGAACCTTATGTTTTCCAACGCGCGGCAGTTCAAC
GTGGAGGGTTCTCAGATTTACAACGACGCCATGATTCTGCAGCAAGAAATGATGTTGCTG
GCCGACGAGGAGATGCGAAAACCTGACTCTACATACCAGGATCTGGCCTCGCGAAACAAC
AACAAAACATCACGCCTTCCCCTGGACAGTGTCCAGCATCGAGGTGACATCTACCGAGTG
GGTGACTGGGTTCATATTCACAACATGAATGATCCCTCCAAACCCACCATTGGCCAAATC
TTCCGAATCTGGCAGGCTCCCGACGGTCAGAAGTGGGTCAATGCATGCTGGTACTACCGG
CCCGAACAGACCGTTCATCGAGTAGACAAGGTCTTCTACGAGAACGAGGTGGTCAAATCG
GGCCAGTACAGAGACCATCTGGTGGACGAGATTCTGGAAAAGTGTTTTGTCATGTTCTTC
ACACGGTACCAGCGAGGTCGGCCCCAGGGCATTGGTGACAGAAAGGTGTACCTGTGTGAA
TCCCGATACAACGAGGTGGAAAAGACCTTTAACAAGATCCGAACTTGGAAGGCGTGTATC
CCCGACGAGGTAGACTCTCAGGATTACGCCATGGACCTGTTTGAAAAGGTTCAGCCTCTG
AGACGACTGCCCTCTCCCATCAAACACACTCTTGCTCCTGGAGCTCGAGAAGACGATCCT
GTTCCTGAGGCGACCCTGGGCGTGGAGAATGCTCCTCCTGTTGTTGGAGCTGTTTATCGA
CGTCCTTTCGACCCCGCTGACCCCCCGGAGGAACCCACTCCTGCTGACGAGTACATAGAG
CCTCCTCAGTTCCAGCGAACGAACAACACTGGTGACTACGCTTCCCCTCAGCCTCATGGA
ATGGGGGCCAAGCCTGCTTCTGGCCACCTGGCTCCTCGACCTGCTCCAGAACAGCCCGCT
GTTCGAACTGTGGTTCCTGGGACCAACTCTGCCCTGCCACCTCATTACACCCCTGCTCCT
CTGCAGCACATTCAGATGCAGGGTCCTGTTCCTGTACATGCGCAGCCTATTGGGCCTGTT
GGCGAGCAGCAGATCTTTCAGGTGGTGGGTCCCCCCGTCAACTTCACGCTTCCTGAAGCT
GTGCAGCAGCAGCTGAGTGCAGGATATGAGCTGGATCCCGAGACGAACGAGCCGTCCAAG
GTTGCTCGATGGCCTACTAAAGAGAAAACCATGGCTGTGCAGTGGTTCATTTCGCCGCCT
GTGCACTGCCCCGACACTTTTGAGCCCTGCAAAGACACGCACATGTACGGAAAGCTCAAG
CTGTCCAAGTATGGAGAGCCTCCGAAGAAGATGCGTATTGTGCGAGTCGGGCACAGTGCA
AAGTACTTGGCTTTCAAAGCCAAGAGGGCCGCAGAGAGTGCCAAGGGGGGTGCGAAGTAG
AGTATTGGTGGTGGTACCAAGACTAGGGGACGATAGTGTTTATATTGTAATTTTATGAGA
TTAACGGTTGGTGTGAGCGATGGTTGTTTGAGTCGACAGCAAGCACAATCTGATTTGATC
AGCCGCTCTTCACACAATCTTGGGGGTGGTTTGGCGCAGTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20702g_CDS-001

Protein length: 760 aa.
Product: Conserved hypothetical protein

>YALI0D20702g_CDS-001 MNQSIADAIETARPAVMKAAAANAPISDLISPLFDGIYTIDNDIDNNKVFEVFHSLPDRS
LTTYYKVIKRPLSLTQIKRSMPRYRNVQNFIHDLAQITYNARLFNMKGSGIYNDAVFLDG
YLNKAIAVLRETNKFSNDDLTYPVIGPLPEGSDVEMEFGSDSSEDDLSDDSDDDDVDGRR
KSRRKSVRTRKKMDSDSQRSRMDDMPRKRGRPPIVDKPHEYRIKAILRGVRKARDEQGLV
RSFPFEKLPEKRDYPEYYQEIAKPIALDNIKKNIKRRKYDTVEAFLNDMNLMFSNARQFN
VEGSQIYNDAMILQQEMMLLADEEMRKPDSTYQDLASRNNNKTSRLPLDSVQHRGDIYRV
GDWVHIHNMNDPSKPTIGQIFRIWQAPDGQKWVNACWYYRPEQTVHRVDKVFYENEVVKS
GQYRDHLVDEILEKCFVMFFTRYQRGRPQGIGDRKVYLCESRYNEVEKTFNKIRTWKACI
PDEVDSQDYAMDLFEKVQPLRRLPSPIKHTLAPGAREDDPVPEATLGVENAPPVVGAVYR
RPFDPADPPEEPTPADEYIEPPQFQRTNNTGDYASPQPHGMGAKPASGHLAPRPAPEQPA
VRTVVPGTNSALPPHYTPAPLQHIQMQGPVPVHAQPIGPVGEQQIFQVVGPPVNFTLPEA
VQQQLSAGYELDPETNEPSKVARWPTKEKTMAVQWFISPPVHCPDTFEPCKDTHMYGKLK
LSKYGEPPKKMRIVRVGHSAKYLAFKAKRAAESAKGGAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG