YALI0D20262g

Overview

Description similar to uniprot|Q02896 Saccharomyces cerevisiae YPL087W (ohnolog of YBR183W) YDC1 alkaline dihydroceramidase
Locus type CDS
Locus tag YALI0D20262g

Location

Species Yarrowia lipolytica Positions 2565264..2566297
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1034 (nuc.)
Previous locus YALI0D20240g Next locus YALI0D20284r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20262g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20262gYALI0D20262g_mRNA-001YALI0D20262g_CDS-001

Nucleotide sequence

 

>YALI0D20262g
ATGCTACCTGGAGGAATCCCATACCCACCACCCGTGGACAACGGCTACTGGGGCCCCACG
ACATCGACCATTGACTGGTGCGAGGAAAACTACGTGGTCAGCAAATACGTGGCGGAAATC
ATGAACACCACCACAAACGCCGTGTTCATGATCATGGCGCTGTACACCATCATTAACGTG
TACCGGGAGAAACACCACCCCACCATCATTTTCGCCGCCATTGGCTTTTTCATTGTGGGA
TTTGGTTCCTGGATGTTCCACATGACGCTGTGGTACGAGTTCCAGCTGCTGGATGAGCTA
CCCATGATCTACGCCACCTGCGTGCCGTTGTACATTGTCTTCTCCAACAAAAAGAGCAAC
CACTTCAAGACGCTGCTGGGCGTCGGAATCGCCGCCGGTGCCCTGTTGCTCACAGCCATC
TACCTGCACAACAAGAACCCCACCTTCCACCAGGCCGCCTACGGTATTCTCAACTTCATT
GTCATTGGAAAGTCTGTGGCTCTGACTAAGGCCTACATTTCCGACCAGAAGACCAAGAAC
CTCTTCTGGCGACTGCTCGCCCTTGGCCTCTTCTCCTTCCTCTTTGGCTACTTTCTGTGG
AACCTGGACATCCACCTGTGCAACCAGTGGATCAAGATCCGACGAGAAGTCGGCCTGCCC
TACGGTCTGGTTATCGAGGGCCATGCCTGGTGGCACATTTTCACCGGACTCGGAGTCTAC
ATCTACATTGTCTACCTGTGCTACCTGCAGGTCTTCCTGGCCAAGCGACAGCACCTCTAC
CACTTTCTCTGGTGGTGCGGCTTCTTCCCCCACGTGGATCTGCTGCCTGAAGCCAAGTCT
CTGTGGAACAAGCTGGGCCGAGCTCCCACCGAAACTGAGATGGCCGAGGTCAATTCGCTC
AGTGGAGTCAAGCGAGTCTCCTCCATCCATGCCAAGAGCTCTTCTGTTAACCATCACAAC
TAGATGGCGTTTGACAACTAGATAGGACATGTATATTAACAGTATTTAATTCACAAGTCG
TTGCTGTCGGTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20262g_CDS-001

Protein length: 321 aa.
Product: Alkaline dihydroceramidase, involved in sphingolipid metabolism, putative

>YALI0D20262g_CDS-001 MLPGGIPYPPPVDNGYWGPTTSTIDWCEENYVVSKYVAEIMNTTTNAVFMIMALYTIINV
YREKHHPTIIFAAIGFFIVGFGSWMFHMTLWYEFQLLDELPMIYATCVPLYIVFSNKKSN
HFKTLLGVGIAAGALLLTAIYLHNKNPTFHQAAYGILNFIVIGKSVALTKAYISDQKTKN
LFWRLLALGLFSFLFGYFLWNLDIHLCNQWIKIRREVGLPYGLVIEGHAWWHIFTGLGVY
IYIVYLCYLQVFLAKRQHLYHFLWWCGFFPHVDLLPEAKSLWNKLGRAPTETEMAEVNSL
SGVKRVSSIHAKSSSVNHHN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG