YALI0D19580g

Overview

Description weakly similar to uniprot|P32901 Saccharomyces cerevisiae YKR093W PTR2 Integral membrane peptide transporter, mediates transport of di- and tri-peptides
Locus type CDS
Locus tag YALI0D19580g

Location

Species Yarrowia lipolytica Positions 2481040..2483205
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2166 (nuc.)
Previous locus YALI0D19558g Next locus YALI0D19602g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19580g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19580gYALI0D19580g_mRNA-001YALI0D19580g_CDS-001

Nucleotide sequence

 

>YALI0D19580g
ATGGAGACTCCAAGCCTGGCCCAGAGCGATTCCAGCGGAGTCAGTCTGTTGCAACTAGCT
GGAGACATTGAAGAGACGCCGAGAGTAATGACTATTGGCAGTGCCAGAGACACAAATCCC
ACCGACACATGCGCAGACGATGCCCACAGACCCAGCACCAACACATCCACTAGCCACCCC
CAAGACACCCGCTACAACAGTAACCTGCGACTTGAAACCGCCAACACAGACAGCTACGTG
AGCGTTTGTGATCTCGACAACTACGGAACGGCCTCCTTGCGACACTCGCCTTCTCGTGAC
ACAACTCTCGACCCTACATACACCACCAGACACGATATTACCACGGTCACCACCCCCCAC
ACTAGCCACACGGAAACAAGCCCGCTGCTCAAGAAACCCACCTCCATGACTACCGACGTT
GCCGACTCGGAGGAAGGCGAAATCATCTCGCTCCCAGACCTCCCCGAAGACGTGCCCCAC
ATCTCCGATAAAATCCCCTACTCGGCCTATCTGGTGGCAGTAGTCGAGCTCTGTGAACGG
TTCACCTACTACGGACTCTCGGGTCCCTTCCAGAACTACATCCAGAACCCGCGGGAGGGC
CGACTACCTGGAGCCCTCGGCCTGGGCCAACAAAAGGCCGTGGCTCTCCTCTATGCCTTC
CAGTTCTGGTGCTACCTAACCCCCATTTTCGGAGCTATCATTGCTGACTCATACTGGGGC
AAGTACAAGACAATTCTTCGGTTCGCCATCGTCAATGTTATTGGCGTCTTTGTGCTGGTG
ATCTCTTCTCTTCCCGTCAACATTGACAACGGATGGGCTCTCCCAGGCCTGCTGCTGGCC
ATGGTCATCATCGGACTCGGAACAGGAGGAATCAAGGCCAACGTGAGTCCTCTGATTGGA
GAGCAGTACCGAAACGAAAAGTACAGACTCGTCTATACCAAGAACGAGTCTCAAGCCATT
ATTTCCCCTGTCGTCACCATCCAGTCCATCTTCATGATCTTCTACTACTGCATCAACATT
GGCTGCCTGGCCCCCATGATTACATCTTACGTGGAAATGAAGGTCGACTTCTGGGCTGCT
TATCTCATCCCTGGCGTCTTTTTCTTCTTTGGAATGGCTGCCCTGGTTATGGGAAGAAAC
ATGTACTACTGCGCTCCTGTCAAGGGAAGTGTTGTTCCCGATGCCGTGGCTGTCTCTTGG
ATGCTCTTCAAGGAGAGAGGCAACAAATGTGACACTGAGACAAGCGCTCTCCCACGGGAC
ACCGATGCTGAATCTTCCTCTCGTACCTCCCAAGAGTCTCTGCTCTCCCAGGACCTTGAA
ACTTCCCCCGAGTTCATCTCCTCCGTCGACACCACCATCTCTCCTCGAGCCATGTACGTT
TCCAAGGCCTCGGGCAACAAGTATTCTGCTTCCTTCGTGCAGGATATCATTGTCACGCTC
AAGGCATGTCGGGTATTCCTCTTTTACCCCGTCTACTGGCTTGTTTACGGCCAGATGACA
TCCAACTTCATTGCTCAGGCTGGTCAGATGAATACCTACTCCATTCCCAACGACATTATG
AGCAACATTGACCCAATCACCCTACTTCTGTTCATTCCCATTGTTGAGAAGAAGTTATAT
CCCTGGTTGCGATCTCGAGGCTACTCGTTTGGTCCTCTTGCTCGAATCTTCACTGGCTTC
TTGTGTGCTGCATTGGCCATGGTCTGGGCCTGTGGAGTGCAGGTGTTTATCTACCGAGGC
CAGGCAGACACAAAGATTGACGAGGTTGGTGTGGAGAACCTGGTATCTGTCTTCTGGCAG
GTGCCTGCATACATTTTCATTGCATTTTCCGAGATTTTGGCCTCCGTCACTGGTTTGGAG
TATGCATTCTTGAACGCTCCCAAAACGATGAAATCACTGGTTATGAGTGTCTTCCTTGTC
ACCAATGCTGGTGGTTACGCCATGGGTATTGTCATTAGTCCGTGGTTCAAGGACCCCTAC
ATGGTGACTTGTTACTTCTGGATTGCCGCATTGACGTTTGCCACAGGAGCTCTGTTCCGA
TACTGCTTCAGGGACTGATGAGGTGTGAAGCACGAGCTCATCGGGTGATTACTCGCGTAG
TAGCTGAGGACCACTGTTGCATTAAGCATACTTGTACTTAACATATTGCATTTGATTGAC
TGTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19580g_CDS-001

Protein length: 686 aa.
Product: Conserved hypothetical protein

>YALI0D19580g_CDS-001 METPSLAQSDSSGVSLLQLAGDIEETPRVMTIGSARDTNPTDTCADDAHRPSTNTSTSHP
QDTRYNSNLRLETANTDSYVSVCDLDNYGTASLRHSPSRDTTLDPTYTTRHDITTVTTPH
TSHTETSPLLKKPTSMTTDVADSEEGEIISLPDLPEDVPHISDKIPYSAYLVAVVELCER
FTYYGLSGPFQNYIQNPREGRLPGALGLGQQKAVALLYAFQFWCYLTPIFGAIIADSYWG
KYKTILRFAIVNVIGVFVLVISSLPVNIDNGWALPGLLLAMVIIGLGTGGIKANVSPLIG
EQYRNEKYRLVYTKNESQAIISPVVTIQSIFMIFYYCINIGCLAPMITSYVEMKVDFWAA
YLIPGVFFFFGMAALVMGRNMYYCAPVKGSVVPDAVAVSWMLFKERGNKCDTETSALPRD
TDAESSSRTSQESLLSQDLETSPEFISSVDTTISPRAMYVSKASGNKYSASFVQDIIVTL
KACRVFLFYPVYWLVYGQMTSNFIAQAGQMNTYSIPNDIMSNIDPITLLLFIPIVEKKLY
PWLRSRGYSFGPLARIFTGFLCAALAMVWACGVQVFIYRGQADTKIDEVGVENLVSVFWQ
VPAYIFIAFSEILASVTGLEYAFLNAPKTMKSLVMSVFLVTNAGGYAMGIVISPWFKDPY
MVTCYFWIAALTFATGALFRYCFRD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG