YALI0D19316g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D19316g

Location

Species Yarrowia lipolytica Positions 2445380..2447697
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2318 (nuc.)
Previous locus YALI0D19299r Next locus YALI0D19338g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19316g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19316gYALI0D19316g_mRNA-001YALI0D19316g_CDS-001

Nucleotide sequence

 

>YALI0D19316g
TGGCGACGATACTCGGACGACCTTCCACCACTCGCAACAGACTCCTTCTGCCCTCCTCCA
CTCCTCCTCCATCTCATCAATCACCACACCACCACCCCGGTTCACCTCTTCCCAATCCTT
ACCTCCAGACCTCTCTACCGGCGACATCAGAAACGTCCACCACCTTCGAGGCACAAAAAC
AAACGACCTACCGCCTTGTACGACACGCTCTCCTCTCTCTCTCTTCTCTCACTCCATCTG
AGGCTTACACTCTTGTACGGCTCCTACCATTGCTGTTTAAGCCAATCTCGCATTGTATCA
GCCTCATCATACATACTCGACCTGTAACACGACCGGTTGGTAAACACAACATTAACACGA
CATATAAGACCACAAGACTGTCAACATAACAGAACATCTGTTGTCCACATTGTCAGTGCC
TCCGAGCCCCCTTTCTCTTGCCCGTCCCCTATCTGAACCCGCTCGACCACCATGGCTATC
TCCCGCACACTCACTAAAACGTTCAAAACCATCACTCGGTCTAAATCGTCGCCTTTTCTG
AGAAAACAGTCCGACGACGACGATGATGAGACAACAATCACCTCGCTCCAACCCATGGTG
CCTCCGCCCAAGCAGCTCCGACTGGATCTCGACTTCGCTGATACCCTGAATCTCGACTTC
CACCAGCTCGACTTTTCGGACGACTCCAAACTGCAGGCGTGGACGGAGAAAAATACCCCC
AAAACGACGATCGACGAAAGCTACTGGCTGGGCGAGCGCGTCGAGTGCGAGTCACGTGAC
CGCAAGTCCGTGCTCGCCCCCGAGTCGGTGTCCAACGGCTTCTTTGAGTCTCCCTTGAGC
ACTCCTACCACACCAGGTAGCGAGTGGCAACCGGGACCTGGCCTCAGTGAACTTGAACGA
TGCGAACGAAAATCGCACGACCGACACGCACCAACAAACGCGGTCGGCTCCCACACCTCA
TCACGATCTCTACGACACGCTCAATCACCCCCCACAATCAACATCCAGTCACGTGACAAG
AGCTTACCCAAGCCGCCTATTGTCCAGAGACCTCAAATGAGCCAGTCCAAGTCGTGTTCG
CATCTTCCTAAGCGAACCAAGTCGCACAATGGATCTTGCATTTCGCCCCAACCGACACAT
GCCTCTCAGTTTGTTAAGAGCAGGGTTGCGAGCGAGAGTCACAGTTCCAACTACGGATCC
AATCACAGATCCAATCACATGGCTAACGCACCTCCTACTCCCCCTCACAACATTGGTACC
TATGGAATGACTAACACTCCGGTCAAGTCGCACATACCCAACCCCTCTGTTGACTCGTTT
ATCACGTGTACAGACACATCTCCTCAACTGTCTTCATCACGCGATATCCATCAGCGCAAC
ATGTCTATTGCCTCTGTCGACACGGTCTCGGCTTACATGGACCCTGCTCTTGCCAGCACC
ATCAGCCGGTACTATCATTTGGAGGGCGTAGACGAGACGCCCAGTAACCGACAGTCACGT
GACTTCCCTAACCAGCAGCTCTCTCATCAACAATCACGTGACCTTGTCTTCTCCTCTGGC
AACCGCCATTCTAGAGACTTTGCCATGTCTTCTGGCAACAGACAATCTCGACAGTCCAAC
GACAGCCCATTCAATACACCCTCTCTCGACGACCGCAACTCGTCGTCCACCTTCACCATG
TCACCTTCGACCTCCACGACCATGTCGACTCCGTCGCTGGTGGATTCGCCCTCTTCATGT
GCTTCTGTCAACGTGAGCTTTGAAAAGCCTGTTAGCCATGGAAACGTGACTCATACACAG
TCTTTCCACACACAAGGTACGACCCAACCTCTTCACGTGACTCCTGCTGTGCCTCCAGCT
CGTCCTTTCACTCTGTACTCCACAGACAATGATCTGGTGCCTCCTCCCCGGTCAAAGTAC
CGATCTCGACATTACCGGTTTGATTCTTCGTCTTCGTCGGTTTATTCCAACAATTACGTC
AAGGAGGATTACATGGGCGCTCTGCGACAATCGCTCTATGTTCCTAAAGATGGGGAAGGT
AGCCCCAGTATTAGGCCAGTTTCTGCGTTCGGTGTTCCTCAAATTTCTGCTGAAGATTAT
GCCAGTGCGATTAAGGAGGGGCAGTGGTTCTAAGAGGAAACAATGGGCCGCACTGTCCGC
TGTTTATCTCCGTTGAGTAGTATGTTGTCTAGGTAACAGAAGTGTGTCTTCTGTCTGTCA
TTCATACTCACAATAATTGCAGGCCGTCCGACACGGGTTCTGCCGTGCAACAAGTGCACA
TCATAATGTATTTATTTCAATAAAATTAGTATCATCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19316g_CDS-001

Protein length: 554 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D19316g_CDS-001 MAISRTLTKTFKTITRSKSSPFLRKQSDDDDDETTITSLQPMVPPPKQLRLDLDFADTLN
LDFHQLDFSDDSKLQAWTEKNTPKTTIDESYWLGERVECESRDRKSVLAPESVSNGFFES
PLSTPTTPGSEWQPGPGLSELERCERKSHDRHAPTNAVGSHTSSRSLRHAQSPPTINIQS
RDKSLPKPPIVQRPQMSQSKSCSHLPKRTKSHNGSCISPQPTHASQFVKSRVASESHSSN
YGSNHRSNHMANAPPTPPHNIGTYGMTNTPVKSHIPNPSVDSFITCTDTSPQLSSSRDIH
QRNMSIASVDTVSAYMDPALASTISRYYHLEGVDETPSNRQSRDFPNQQLSHQQSRDLVF
SSGNRHSRDFAMSSGNRQSRQSNDSPFNTPSLDDRNSSSTFTMSPSTSTTMSTPSLVDSP
SSCASVNVSFEKPVSHGNVTHTQSFHTQGTTQPLHVTPAVPPARPFTLYSTDNDLVPPPR
SKYRSRHYRFDSSSSSVYSNNYVKEDYMGALRQSLYVPKDGEGSPSIRPVSAFGVPQISA
EDYASAIKEGQWF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG