YALI0D19272g

Overview

Description weakly similar to uniprot|Q09710 Schizosaccharomyces pombe Hypothetical protein C18B11.03c in chromosome I
Locus type CDS
Locus tag YALI0D19272g

Location

Species Yarrowia lipolytica Positions 2434728..2436059
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1332 (nuc.)
Previous locus YALI0D19250g Next locus YALI0D19294g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19272g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19272gYALI0D19272g_mRNA-001YALI0D19272g_CDS-001

Nucleotide sequence

 

>YALI0D19272g
ATGTCTGCTTCTTGCAAATCTCGCCCTCTAGGCCCCCACGAAACTTATGGCACTGTACAA
AGCATTCTCGGCCTCTACTCGAATGTGATTGTTTCAGCCACTCTATACAAACCCACCAAT
CGTCAGGGGGCTCTCTACGCCGCCAAGATCCTCCTGGAGAAGGAACCGCTTCTAGGAGTG
TCAATTTCAGGCCAGGAAGGGACATTCAAGATGACGAAACTGAGAGAAGCCAAACTAAAC
AACTATGTGGACGATTCTCTAAACAGCAAACTGCTTGAAGATGTGGTTACAGACCTTCAC
TACGTGCGCCTGGACCTCTCTAAGCAACAGTGGAAGTTGCTTCTGCTCAACAACGGCAAG
GAGATTGTGTTTCTTTTCGATCATGCCCTTCTGGACGGCATGTCGGGGTTGTTTGTGATC
GAAACAGTTGTCAAGGCACTTCAGGAGTACTCTTCACATGACCTGGTTTCTCTGACCACG
ATCCCTAACCCTTCCACTCCTTTACCTTTGCCAGTGGAACAACAGCTGGTTGCGTCTCCC
CCTTTCACTCTGCTTTTGAAGGAACTGTTCAAGGAGTATCTTTTCAGCGAGAAGGTGTCG
ACACTTCCACTTCAGAAACATGATTGGAAGGGATATCACTCCATTATCGACTTTACTCCT
TTCCAATCACGTGCCTTCTACAACATGTGTAAGAAGTATGGGTTCAGTGTTGGGGCAGGT
CTCTATGCACTTCTTGTGAGCTCTTCTTCGGGTGTACTTCACCGCAAGTATCCAGATGCA
GTTTCTGGCCCAGTTCGAGGTCTTGTTCCTCTGAATGGTCGAAACTTCACTCCCAAACTG
GACCCCAAACGTCTCGGAGTGGTTGTGGGAGAGATTTGCATTTCTACGGTTGTCCCAAAG
CCCGAAGAAGTGATTGGGCGGGTTCCTAGTCGTGCTTTCGTTAAGATAGCCCACCAATTC
AAGTCCAAAATTACTCGCGACACTCAGCAGACCACCTTCTCAGGGTACCCCTTTATGCAA
CCTGTGGGACTTATTCCCTGGGTCCGTTCGCTTCAGGAGTACTTCAAGAAGCACACAAAC
AACCACCAGCGGTCTTCCATGTTTGCTATGAGCAACTTGACGTGCTCGGATGTACCCTGT
GAGCAGCTCAGGTTCACCCAATGTACCGGAGGCATTTCTCCTTTCATCCAGTACTCGGTT
GTGGGACTTAAAGACAAAGGTATCAGTGTGGGACTGGGTGTTTCTGAAGACAAGGAAGTT
TTGGATGAGGTCAATAAGTCCATGAGATGGTTTATCCAGGAGTGTGAGAACTCATTTGGC
AAGGAAGTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19272g_CDS-001

Protein length: 444 aa.
Product: Conserved hypothetical protein

>YALI0D19272g_CDS-001 MSASCKSRPLGPHETYGTVQSILGLYSNVIVSATLYKPTNRQGALYAAKILLEKEPLLGV
SISGQEGTFKMTKLREAKLNNYVDDSLNSKLLEDVVTDLHYVRLDLSKQQWKLLLLNNGK
EIVFLFDHALLDGMSGLFVIETVVKALQEYSSHDLVSLTTIPNPSTPLPLPVEQQLVASP
PFTLLLKELFKEYLFSEKVSTLPLQKHDWKGYHSIIDFTPFQSRAFYNMCKKYGFSVGAG
LYALLVSSSSGVLHRKYPDAVSGPVRGLVPLNGRNFTPKLDPKRLGVVVGEICISTVVPK
PEEVIGRVPSRAFVKIAHQFKSKITRDTQQTTFSGYPFMQPVGLIPWVRSLQEYFKKHTN
NHQRSSMFAMSNLTCSDVPCEQLRFTQCTGGISPFIQYSVVGLKDKGISVGLGVSEDKEV
LDEVNKSMRWFIQECENSFGKEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG