YALI0D19228g

Overview

Description some similarities with uniprot|E6QZD3 Cryptococcus gattii hypothetical protein CGB_A2180W
Locus type CDS
Locus tag YALI0D19228g

Location

Species Yarrowia lipolytica Positions 2432414..2432979
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 566 (nuc.)
Previous locus YALI0D19206g Next locus YALI0D19250g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19228g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19228gYALI0D19228g_mRNA-001YALI0D19228g_CDS-001

Nucleotide sequence

 

>YALI0D19228g
ATGGACAAGAAAATCGCAGCCAAAATTTTCCGCAGGAAAAATGACAAGAAACCCGTGGCA
AATGGACCGGCCAAAAAACGCATGTCAGCCACGGCCGTGAAAGACATGCTGTTCCACAAG
GCCGTGACGTCGACGCCTTCCGACAAGCCGCCGATTTTTGCAGGCTGCACAATCAACATT
TCCTATATGGCAGAGTCCGGGGTTTCTGACTTGCAACTCAAGAAGGACATTATTGCTCAT
GGAGGCCGCGTGTCTCGTGTGATCACAGCTGGAGTGACACACGTGATTGCCCGCAACTTC
GCCGCCGGCAAGCACGACAAGGTGATTGGTCGGGCTGTTTCTGTTGACTGGGCTCTGGAC
TGTCTCAATCAAGGCAAGAGGCTCAGTGAGGGCCAGTATCGGCTTGCCCAGGCTTCTCCA
GGTCAGCCCAAGATTACCCTTGGAGGTCAACAAGGAGCCTCTCAAGCCTCCGCTCCAACC
GCTTCAACGACCACCGCCTGACTCGAATTCGTTATATTCACCCGTTATTTATTTTGCATC
TTCAATATATATCCATTCCTTGTCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19228g_CDS-001

Protein length: 167 aa.
Product: Conserved hypothetical protein

>YALI0D19228g_CDS-001 MDKKIAAKIFRRKNDKKPVANGPAKKRMSATAVKDMLFHKAVTSTPSDKPPIFAGCTINI
SYMAESGVSDLQLKKDIIAHGGRVSRVITAGVTHVIARNFAAGKHDKVIGRAVSVDWALD
CLNQGKRLSEGQYRLAQASPGQPKITLGGQQGASQASAPTASTTTA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG