YALI0D18766g

Overview

Description some similarities with uniprot|P10849 Saccharomyces cerevisiae YDL044C MTF2 Mitochondrial matrix protein that interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p)
Locus type CDS
Locus tag YALI0D18766g

Location

Species Yarrowia lipolytica Positions 2368771..2370239
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1469 (nuc.)
Previous locus YALI0D18744g Next locus YALI0D18788g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18766g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18766gYALI0D18766g_mRNA-001YALI0D18766g_CDS-001

Nucleotide sequence

 

>YALI0D18766g
ATGCTCAGAGCACAGTACAAGGTTTGTACAGGCCGGCAGACGCGGCTCCTGCACTCGGCC
TACGTGCTGCGAAAAAAATCCGACTATGAAGACACCTTTATTGGCGAGTTTGAACCTCCC
TCCACCAAGGCTAGGGGTTCGTTCAAGGACCCGTTTGCTGCATTCAAGAAAGCCACGAAA
GAGCAGGGCGACGATCCCCTGACATTTAGCAAGTTCTCTTTCAACGACGACAACCTGGAC
AGCTCAGATATCGGTTTCGACGATTTCAGCTCCGGATTTAACAAGACCAACCGATTCAAA
TTCGATGCCATGGAGGACGAGACCAAGGCATTCGACGCGCTTGGCCAAGACGATCACAAC
AATGCCACGTTCGACTGGTCCGGCGGACTCGATCAATGGGGAAAGTCTGATATGTTCCCC
GAAGAGCCTAAGAACCGATATGTCATGCCCCAGAACCTGGATATGTCGCCGTTGAGAGGC
AACAGCGACCAAATAAGTACACACGTTATTCCCCCGTCCGAGTTTGGAGGAGCTCTGGGG
AGCTCTGCGCCGTTTGAAAAGATTTTTGCAAAAGTTATGGGGGAAGAAGCGGCTACGGAG
ACAGCAACAGGAGCAGGAACGCCACCAGTGTCGCATGAGTCTGAGTACGAGTCCCGTGAA
ACCGCAAACTTGGATGCTATCAGACAAGCCAGTGGAGTCGAGCTTTCCTCTATCAACTCG
CCATATGTGAATCTGTTCAACTCTGGTGTTCCTGACATGTTTGTTGAGATCTGTGCCGAG
CCCGATATGGATGTTCGACATGATCGGATTGATTCTCTGGATCTCAAGGAATGTACCGAG
GTGGAAATTGCTATGATGGAGCAACTCAAGAAGCTGATTCGATTGGATTCTGACTACGAT
ATTCTTGAGTTCATGAACAAGCAGCTCGATGAGATCGAGGACATTGGCCAGAGCAGAAAA
AACCTCCCCTCTGAACTGCCGCCTGTGGCTGCCGGGTTCCCTCTTCTGCTCAACGAGTCT
CTGCAGCTTCTGGTGGAGAAGTTCGAGTCCCCTGCTGACTCCGTGGCTCTGTTTGACGCC
GTCAAAACCCGTTCCGGCAACCTCTACTTTGCTACCGTGTCCACAGACGTGTACTTCACT
ATGATCAGGATTGTGTGGGAGTTCTACCGAGATCTTTCCACGCTGTCGGTGCTCGCGTCA
GACATTGCGTTGATGAATATCAAATCTCGAGCCTTGATCAAGGCAATGGAGGACATTGAG
CGAGACTGCTACAAGACGTTGGAGTCGCGCAAGCGACGGGTGCCCGAGTATGAGGAGTCC
ATCACTGCGCGGGTGCATGCCGAGACCCTGCGGCGGTTTTCGCTCATTATTAACTACCTG
AGACGAGGACTCAGAATGAAGGACAATCGGCAGAGAGCGTTCCGATTGAGAGGAGAAGTT
TGTACATATTAATTCGCATTTTACTACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18766g_CDS-001

Protein length: 484 aa.
Product: Conserved hypothetical protein

>YALI0D18766g_CDS-001 MLRAQYKVCTGRQTRLLHSAYVLRKKSDYEDTFIGEFEPPSTKARGSFKDPFAAFKKATK
EQGDDPLTFSKFSFNDDNLDSSDIGFDDFSSGFNKTNRFKFDAMEDETKAFDALGQDDHN
NATFDWSGGLDQWGKSDMFPEEPKNRYVMPQNLDMSPLRGNSDQISTHVIPPSEFGGALG
SSAPFEKIFAKVMGEEAATETATGAGTPPVSHESEYESRETANLDAIRQASGVELSSINS
PYVNLFNSGVPDMFVEICAEPDMDVRHDRIDSLDLKECTEVEIAMMEQLKKLIRLDSDYD
ILEFMNKQLDEIEDIGQSRKNLPSELPPVAAGFPLLLNESLQLLVEKFESPADSVALFDA
VKTRSGNLYFATVSTDVYFTMIRIVWEFYRDLSTLSVLASDIALMNIKSRALIKAMEDIE
RDCYKTLESRKRRVPEYEESITARVHAETLRRFSLIINYLRRGLRMKDNRQRAFRLRGEV
CTY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG