YALI0D18700g

Overview

Description some similarities with uniprot|P36146 Saccharomyces cerevisiae YKR063c LAS1 involved in cell morphogenesis, cytoskeletal regulation and bud formation
Locus type CDS
Locus tag YALI0D18700g

Location

Species Yarrowia lipolytica Positions 2359369..2360676
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1308 (nuc.)
Previous locus YALI0D18690r Next locus YALI0D18722g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18700g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18700gYALI0D18700g_mRNA-001YALI0D18700g_CDS-001

Nucleotide sequence

 

>YALI0D18700g
ATGTCGGCAAAAACTACCACGCCCACAGTGACACCATGGGCCAACAAGAGCGAGTTTTTC
GAGCTCAAAAACTGGTTTTTTCCGGGGCTGTCCGACCCCGAAGCCGCCACAGCCTCCAAA
CAGCGCGCCATTGCCCGAACCAAGGCGTATATGATCCGGGGCAACGTTCCGCACGCCGTC
GAGTGCACGGGAATGTTAGTCAGCGCCCAGATCGAAGACACGCCCTCCGCCAACGCCATT
TCGACCCGTCTCGCCATGTCTACAGCGGTCATCAGATTTGTGAACGGAATGATTGACCCC
CATCAAAACGGCAGCTACGTGATCCCCATGCAGGTAATTGCACGTGAAATCGGTCTTCCG
GTCTTTCTGGTGGATCTCAGACACACGTGCACCCACGAGACGCTGCCCAGTTTGCGAGAA
CTGCGTGCAGGGGTCGACGAGGCCGTCACATGGCTCCACACCAACTATTGGAGTGTCCGG
GGCGCTGAAGCCAACGAGTCCGCAACGCCGGCGGCTAACTCGGACGAAATCAAGGAGATA
TTCCGCCAATGGCGCCGTCTCTATCGCGATAACCGGGACTTAAAGGCGCTCAAGGACCTG
TCCAATCCGGGCTCCAAACCGGAAATGCGGTTTGCTTTTTTGGCCAAACAGATTGTGCTA
TATTACAGCTCCGATCCCGCTACTCTGTTTGCCACCATGGTCCACCAAAAGGTGATGCAT
ACCAAGAACCAGATCAACAAGGCTCTTTTGTTGCCCATGCTGAAATCTCTACCCAGCGAG
CTCCTCTCAGATTTGTTTCTGTACATGTTTGACGAGGCCGAGAGAGTCGACAAGCATCAG
ACATTGTCCGAAGAGCTCTCTCTCAACGCCAACCCAGTTGCGGAGTGGCTCGAGGTGTTT
GTTGAACAGGACATGCTGTCCAACGGCCAAAAAACAATGCTCACATGCTCCCGAAGCCTG
GGAAGAACGGCCCTGAACCTGCTTGACATCTATCTGATGCATAAAAACGACCCCAAAATT
GAAAGAATCCGCCAAACAATGCGCGACGTGGTCCTCAGTGGAGAAGCAAGACTCGAAACA
GCTATTGAAACCCAAGATATGGTCCGGTTGGCAAACGAGTACAAACAACGCGTCATGAAA
GAGAACCGAAAGCGGACTGGAGGAGACTTTGTGTCTCTCGGAGCAGAAGAGGTGGAAAAT
GATCAACAGGGACCTTTCAAACGAGTCAGAGTGAAATAGAGGGTATAGAACAGGTGATAT
TTGGTCACGTGACGGTTGAAATGTGATATTAATGTATAATAATGTGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18700g_CDS-001

Protein length: 413 aa.
Product: Conserved hypothetical protein

>YALI0D18700g_CDS-001 MSAKTTTPTVTPWANKSEFFELKNWFFPGLSDPEAATASKQRAIARTKAYMIRGNVPHAV
ECTGMLVSAQIEDTPSANAISTRLAMSTAVIRFVNGMIDPHQNGSYVIPMQVIAREIGLP
VFLVDLRHTCTHETLPSLRELRAGVDEAVTWLHTNYWSVRGAEANESATPAANSDEIKEI
FRQWRRLYRDNRDLKALKDLSNPGSKPEMRFAFLAKQIVLYYSSDPATLFATMVHQKVMH
TKNQINKALLLPMLKSLPSELLSDLFLYMFDEAERVDKHQTLSEELSLNANPVAEWLEVF
VEQDMLSNGQKTMLTCSRSLGRTALNLLDIYLMHKNDPKIERIRQTMRDVVLSGEARLET
AIETQDMVRLANEYKQRVMKENRKRTGGDFVSLGAEEVENDQQGPFKRVRVK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG