YALI0D18502g

Overview

Description weakly similar to uniprot|D5GIM7 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0D18502g

Location

Species Yarrowia lipolytica Positions 2318853..2320470
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1618 (nuc.)
Previous locus YALI0D18480g Next locus YALI0D18513r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18502g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18502gYALI0D18502g_mRNA-001YALI0D18502g_CDS-001

Nucleotide sequence

 

>YALI0D18502g
ATGAACCCCACGTCCTTCTCGTACAGTCTGCCGGAGTCGCCAAACACACCGCGACACCGA
CGCGAGTCGTCGTCCACATACTTCTCCGACGTGTCCGATTCGACAGCCTTCTCCGAAGTG
TCGGACGAACCAATCAGACACAAGGCCACCCCCACAAGCACCAGAACCAGCTGCTGTGTG
AAAAAGCTGCCTCCGGAAATCTGGACCGACATCTTCGAGCTGATGGAGCCCGAAGACGTG
CCAAAAATCAACCTGAGCTGCAAGTTCTTCTACGACGTGACACGTGATCAGGACGTGCTC
AACAAGATAGGGTTACGTAAGCTCCACATTGCCAGCTTTCTGCCCTTCAACAGCTACCGG
CGGTTCCACCGCCACTACCGGAATGTCGTTTGGATGGGGAATGGCGTTTGGTGGGGCGAC
CGGGGTCTTTTCGGCTCGTTTTTGCGAACATATTACGACGTGACGGGCGGGGGCTTCGGT
ATGCAGTTTCTGGTGGTGACCGAGTGCCAGCAGAGGCAGGATGGTGCAAATAGCGACGGA
AGTTATCGCGGAACCAGTGCTGGCACCTATCGCGGCTATAGAGGTCCTGTCAACGAGGGA
CCCGGACGGGGACCCGGACGGGGACACGAACTGGGATCCGGAGCTGCGATTCCAGTCGCT
GGTACTGTCGAAGCCAGCTCTGGCACTTCACCAACGGTGTTGCCCTTCTCTCCTCTGCTT
CAGCTGGCCCCAGTGTCCATCTTCTGCACCCCAGACCTTTACTATGACCAGCTGGGAGAA
CTACATCCCGCTGCAGTAGCGGAACAAATCTCATACGCCGTGCAGCGGTGCGAAAACATG
AGTTTGGCTCGTGACCCTAACAACTACGGTTCACGCGACTCGCTATGGCCTCCCCTGGGC
CATTCGATTGAGCGCACATCAGTGTCGCCGTCTTCTGGCGCTCCTCTGTGTCTCGCGGAT
GCTTCCCACAACCTCTTTCGGCTCAGGAAACGACTGTGTCCATTTAGAACGCCTTCCAAC
GAAGCTGGCGGCTTGACAGAGACGTTTGGCCGCCTGGAGAGCTGGTTTGGGTTCCTAGGA
GGTGTGTTTGTGGCCCCGGGTATCTGTGACGACGGCCCTGTGTTCCTGAATCTTCACCAG
ACCAACTCTCAGCTGACCGCGACCCACATCACGGGAGGTTTGAGAATCCCTCGTGGAGAA
GTTGCGTTTGTGAGCGACTTTACAGAGGTGGAGAATGGGGTGGAGCAGTTCAAGGGCTGC
AAGGCGTACTCTGGATGGGCTCAGGTAGCCCAGCACAACTACGTGGATCCCGAGTATGTG
CCTGTGGTGATGATCATGGTGGATGAGAACACCCTGGCGGTGTGGTGGAGAAGCGGAGGG
GTGGTGACTATGGTCAAGAGAGTCGACTTGGCTTCGGTAAGAGCAGGCACTCCTAGATTG
AGTGAGCAGACAAAGAGCGCTGCCAGTGCGTTGAAGCAATGCAGGTGAGTCTGACCTGGA
CCTCTCCACCCATAGACTGAGGATGACCACTGGATGGTCTCTGCAAGCCAGTCTGCATAT
TTATTTCAACTACTGCTGTAGTTATTTCTTATATTTATTAATTGAGCTTTTAAATGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18502g_CDS-001

Protein length: 496 aa.
Product: Conserved hypothetical protein

>YALI0D18502g_CDS-001 MNPTSFSYSLPESPNTPRHRRESSSTYFSDVSDSTAFSEVSDEPIRHKATPTSTRTSCCV
KKLPPEIWTDIFELMEPEDVPKINLSCKFFYDVTRDQDVLNKIGLRKLHIASFLPFNSYR
RFHRHYRNVVWMGNGVWWGDRGLFGSFLRTYYDVTGGGFGMQFLVVTECQQRQDGANSDG
SYRGTSAGTYRGYRGPVNEGPGRGPGRGHELGSGAAIPVAGTVEASSGTSPTVLPFSPLL
QLAPVSIFCTPDLYYDQLGELHPAAVAEQISYAVQRCENMSLARDPNNYGSRDSLWPPLG
HSIERTSVSPSSGAPLCLADASHNLFRLRKRLCPFRTPSNEAGGLTETFGRLESWFGFLG
GVFVAPGICDDGPVFLNLHQTNSQLTATHITGGLRIPRGEVAFVSDFTEVENGVEQFKGC
KAYSGWAQVAQHNYVDPEYVPVVMIMVDENTLAVWWRSGGVVTMVKRVDLASVRAGTPRL
SEQTKSAASALKQCR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG