YALI0D18458g

Overview

Description similar to uniprot|P40015 Saccharomyces cerevisiae YER019w ISC1 Inositol phosphosphingolipids phospholipase C
Locus type CDS
Locus tag YALI0D18458g

Location

Species Yarrowia lipolytica Positions 2313012..2315171
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2160 (nuc.)
Previous locus YALI0D18436r Next locus YALI0D18480g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18458g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18458gYALI0D18458g_mRNA-001YALI0D18458g_CDS-001

Nucleotide sequence

 

>YALI0D18458g
ATGTCTGAGAAAACTTGGAGCAACGACACAATTTCGATGAACGACAAGCAGGTCCGGGTT
CTGACCCTTAATTGCTGGTGAGTGCGACAAGAGAGATGGAGGAGGAGGAGATGACGAGGG
GCCGGGCGGAGGCGTTCGAGGGACTCCAAGGAGCAGGAGGAGTGGCAGCCAAGATATCAA
TGACAATCTCACGTGATTCAACACGTGATCAACGTGAATGGGTGGACTAGGACGTGTAAG
GCTGTGTTGTGATACGGCTGGACACTTGTTCTGAGACAACTGCTCCTATGTGGGTGGTAT
CCCCAACACGCGAGGTGTGGCGCAGAAGCTGGTTTAGGCCAACATTTCTTTACAGCTACC
GCTCTCCAACCTCCAGTAATGATCTTCATGCCAGTCTTCCGTGGCAAGTACCCAAGCAAC
TGTTTTCACCCTGGTGTTGTCTACGTTCACTCTAGGCGAACCCCAGCTGACATTGTAACT
TGCTCCGGCCAGTCTTTCCCGTACTAACTCAGGGGCCTAAAACTCGTTTCCAAACTCCGA
CCTCTCCGTTTGGAAGCCATTTCCGCCCAACTCGCCCAAGACGGCGACTCCTACGACATT
GTCTGTCTTCAAGAAGTGTGGGTGGAGTCTGACTTTGACCAGATCAAGAAAGCATGCGTC
GACCACTTCCCCTACACAAAATACTACTACAGCGGAATTATTGCCGGTCCAGGACTGGCC
GTTCTGTCGCGATGGCCCATTGAGTCAGCCTACGTCCACCGGTTTGGCCTCAACGGCCGC
CCCAGTGCATTCTTCCGAGGCGACTGGTATGTTGGCAAAAGTGTTGCCTCCGCCACCATT
ATCCACCCATCCAACCACCGCATTGAGATCCTCAATGCCCACATGCATGCTCCGTATGGC
CCTGGTGATGCCAATTATACATGTCACCGAACTTCCCAGGCTTGGGAAATGGCTCGAATC
GCCAAACGGTCCATGGACGCTGGTAATCTGACCATAGTCACCGGTGATCTCAACTCCCGA
CCGTCGTCGCTGACTCACCAGCTCTTTGAGAACATGGCGCTTCTGCAGGACGCGTGGGAG
AGCCGACACGGAGAGTTTTCCGGCGATCTGAGCGAAATGACACCCGAGCAACAGATCGAG
GAGGCCGGAGTCACGTGCAACTCGCGGCTCAACTCGTGGAGAGCGTCCCGGCCTCTGTCG
GACGCCTGCCGGCTCGATTACATCTTCTTTGACCCCTCCAGAGCTACTGTCCGAGAGGCT
CGAGTGGCCTTTACGGACAAGATTGAGGGCGGATGCAGTGTGTCGGACCACTTTGGCGTT
TCTGCAGTTTTCGAGCTGACTCCTCAGGACAAATCTCGGCACCGAAAGGTGTCTTCTGCC
ACGCTGACGACCATGTTTGACGAGTTTCTCGCGCTGGTGACAACATACAAAGGCACGTCA
ATCACTCAGGCGCGGGTCCGAAACTGGCATTTTATGGCGTCCATTCTGGTTGTTATCGGG
CTTTTGGTGTCCGTGTGGTGGGCGGCAGCTGATAACAGAGCTTATGTGGGTTTCATCTAC
ATTCTGGCAGCCGTCGTCATTGCCGTAACAGGCGTTGTGGACGGTCTGATTGGATACTTG
TTTGGAAATACCGAAATGAGAGCCCTGCTAGAGTTGGAGAGCGAGCTGGAGCTGGCCAAG
CGGATGTTGGCCAAGGAATAGGACTGGCGGACTGCTGGAGAACCAGATTGTGCAATGCAG
GATCCGGTGCATACCGATTATGGTACCTGCAGCGGAGGATAGTCATTGAAACATGTGTTT
CTAGTGTGGTGCAACTGCTCCACAGTCCGTACAGATGAGGAGAGCTAATAACAGAGTCAA
GCGACGACACACTTCAAAATAATCAACAACAAATAATGAACGAGAGCAAAAGCTATTGCA
GTATGTGCACCTCTGGCTTTACGTGCAGAAACCGTTGGGTGCAGTACCGGTTGTTGAGTG
GCGATAGACGGCAGCTCAGGCCATATTGGATGGGAATGTGAAAGTGGGCATCATGTGAAA
GTGGACCAAATGGCCAATTTGAGCTACAGTACCAGTAGTCTGAGGCCTGAGAAATCTTAC
CGTATGGCCGATGTATATATATATGTACTAGTAATGATCTTGAGTGAGTTGTTTAGTGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18458g_CDS-001

Protein length: 422 aa.
Product: Inositol phosphosphingolipid phospholipase C, putative

>YALI0D18458g_CDS-001 MSEKTWSNDTISMNDKQVRVLTLNCWGLKLVSKLRPLRLEAISAQLAQDGDSYDIVCLQE
VWVESDFDQIKKACVDHFPYTKYYYSGIIAGPGLAVLSRWPIESAYVHRFGLNGRPSAFF
RGDWYVGKSVASATIIHPSNHRIEILNAHMHAPYGPGDANYTCHRTSQAWEMARIAKRSM
DAGNLTIVTGDLNSRPSSLTHQLFENMALLQDAWESRHGEFSGDLSEMTPEQQIEEAGVT
CNSRLNSWRASRPLSDACRLDYIFFDPSRATVREARVAFTDKIEGGCSVSDHFGVSAVFE
LTPQDKSRHRKVSSATLTTMFDEFLALVTTYKGTSITQARVRNWHFMASILVVIGLLVSV
WWAAADNRAYVGFIYILAAVVIAVTGVVDGLIGYLFGNTEMRALLELESELELAKRMLAK
E*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG