YALI0D18315g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D18315g

Location

Species Yarrowia lipolytica Positions 2289070..2290630
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1561 (nuc.)
Previous locus YALI0D18293g Next locus YALI0D18337g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18315g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18315gYALI0D18315g_mRNA-001YALI0D18315g_CDS-001

Nucleotide sequence

 

>YALI0D18315g
ATGGACAACCTTCCCACGCCGATTCTGACGCGTATAATCAGCGAAACCGACTACGACACA
GCCGTTGCCCTATGCCACACCAGTCCACGGCTTTCGCAGTTGATCCGGTCGCCCAACAAC
GACACCGCCATCTTCAAGAACATTGCACTACAGACATTCCCATGGTGCCATCCAGCTGTC
GGACAGTCGTGGCGAGACCTGGCGTGGGATGTGGAGAACATCGGGCCCGAGTCGGACGCG
GAAATATGGAAAGAAACGGCCCAATGGACGCTTGCGGACCCCGACACTGATCTGGGTCTG
CTGATCATGTCTGAACACCCTGCCGCCAAAGAGATCGCCAAAGATCACGTGACAAGCCAC
ATTGACTCCCGGGTCCCGCGTGACACGGACATTTGGGGTTCTGGCATTGTTGAGCTCGAG
GGTGGATTGGTAGTGGATTTCGTGGAGGCCAAGGCATGGAAGGGCGAATCAATCGAAGCT
AAGGAGTCACATGGTGCAGAGGATGCAGAGGAGACATTGAAAGAGCAGCCTATTGCACGT
GATATTGCACGTGATTCTCCAAAACTGGAAAAGAAGGGCGACAAGTGGATAATTAATGGC
TTCAGTATTCCCGTCACAACCGGATTCATCCCCACTGTTCATACGCATAACAACCAGACA
TTTGTATTTGAGACCACGGTGGACGTCTCCTGTCCAGACACGGCCATGAGCAATTTGCAC
GTGATTGACTGGGGCGCACGACGGTACATTTTTCTTCTTTCCCTCATTCATGAAGCTGGA
GTGTTTCCTGTTCCGTACCTGAGCAATGGGTTTCTGTGGTTGTTCTACGAGCATTTTGTG
GTCAAGTTCAATGTTGATGAGATCAAATTCGATCCCACTAAAGACAAGTGCACGTCCAAG
ATTTTCTACGTGAGTCAATGTGGCCTTCCTGTGTCTCTCAGAGACTGCAACTTCCAAGTG
CAGGTTCTTTGGGGTCGGTTTGCTAAGATGGGTAGGTTTTTTTTGGATCTGGAAACGCTC
ATGTGGTTTAAGATTGACCATGGTCTTGTTCATGGCATGCTGCACAAGACTCATCACTTG
TGGGACTACTCAAAGGAGGCGTTGGAGAGGATAGCAGAAGTGGTGAAGGACTCAGAAGCA
GTAGATGCAGTCTCAGCAGTCGATATCAGCTCGTGTCTCAAGACAAAGAAGAAAAAGAAG
AGCAAGAAGAAGGGGAGGGATACGTCTACGGAGGCGGATGAGGTGGAAAAGGCAATGGCA
GGCTTGGATGTGAACAAAGACCTGCCTCCAGAACTGCAGATTGATTAGCAGGATGAAATG
GAGACATTCCACATATATGGACAAGACAGAACAAGAATCAGCAACAAAACATGATACAGA
CCATGTCAGTACATCCCAACTGAGACTTAGACTGCACCCCTAACCGCCTACATGACCCTC
GTATCGCATCTCCTGTACTGTACCTACTTTTCACCTATCGTATCTACTGTACCTACCTTT
TCATACATTCCAAAACACTATATCTGATACAAGACCTGTGTCGATAACTTGATCCTCTCA
G

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18315g_CDS-001

Protein length: 436 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D18315g_CDS-001 MDNLPTPILTRIISETDYDTAVALCHTSPRLSQLIRSPNNDTAIFKNIALQTFPWCHPAV
GQSWRDLAWDVENIGPESDAEIWKETAQWTLADPDTDLGLLIMSEHPAAKEIAKDHVTSH
IDSRVPRDTDIWGSGIVELEGGLVVDFVEAKAWKGESIEAKESHGAEDAEETLKEQPIAR
DIARDSPKLEKKGDKWIINGFSIPVTTGFIPTVHTHNNQTFVFETTVDVSCPDTAMSNLH
VIDWGARRYIFLLSLIHEAGVFPVPYLSNGFLWLFYEHFVVKFNVDEIKFDPTKDKCTSK
IFYVSQCGLPVSLRDCNFQVQVLWGRFAKMGRFFLDLETLMWFKIDHGLVHGMLHKTHHL
WDYSKEALERIAEVVKDSEAVDAVSAVDISSCLKTKKKKKSKKKGRDTSTEADEVEKAMA
GLDVNKDLPPELQID*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG