YALI0D17556g

Overview

Description similar to uniprot|Q03175 Saccharomyces cerevisiae YMR101c SRT1 cis-prenyltransferase homologue
Locus type CDS
Locus tag YALI0D17556g

Location

Species Yarrowia lipolytica Positions 2157453..2158466
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1014 (nuc.)
Previous locus YALI0D17534g Next locus YALI0D17578g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17556g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17556gYALI0D17556g_mRNA-001YALI0D17556g_CDS-001

Nucleotide sequence

 

>YALI0D17556g
ATGACAGTATTGTCACTCCCTTCATTCCCCCTCATGCAGTACGCGCGCAACCTGTTCCAG
GACCTACTCGTGCGAGTACTCAGAACAGGACCCGTGCCCCGTCACGTTGCCTTCATCATG
GACGGAAACCGTCGTTTCGCAAAGACCAACAATCTAGAGCTGCGAGAAGGTCACGTGGCA
GGTACAGAGTTGCTGCTCAAGCTACTGGAGGTCTGCTTCCGGATGGGCATCAACACCGTT
ACAATCTACGCCTTCTCAATCGAGAACTTCAACCGACCCAAGGTCGAGACCGACGCACTA
TTTGACCTCATCCGAAACAACATTGTCGTACTCGGTAGCAAGGACGAGATGGCTGAGCGC
TACGGTCTCGCCATCAAAATCCTCGGTAACAGAGACCTCATCCCGGAAGACATTCTCGAG
CTGATTGTCCGTGTCGAAGAGACCACGAAGGACAACAAGCGTGGAACACTCAACATTTGT
TTCCCTTACACCTCCAGAGACGACATAGCCCAGGCAATTCAAAAGGTCGTCACCGACGTG
TTTGCAGACACAAAGCAAGCCCCGCCTCCTAAGTCGTTTGGTCCACCCTCCTCTACCTCC
CGACCCTCTCCCCTCCACGTAACCGAAAAGATGCTGGAGAAAGCCATGTACACTGGTGAG
AGTCCTCCACTGGATATCATGATCCGAACGTCTGGCGTGACCCGTCTCTCCGACTTTATG
TTGTGGCAGAGTCACAAGAACTGCACACTCGAGTTTGTTGACACGCTGTGGCCGGACTTT
GGTGTTCGGGAGCTGTATCGGCTGCTGCTCAAGTGGTCCTACGTCAAGACTCTGGAGTTG
CAGCGGGACGACCTCATCCAGACCACCAAGGTGAACAACAGCACCAAGAACGACTACGTG
GGCAATTACGATGAAGAGGTGAGCTCCCATGCCTCTGCTTTGACAAAGATCTCCTCTGTC
GAAAAGGCTGTTGTTCATGACGAGGGCATTGTTGAAGGCATCTGCATTGACTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17556g_CDS-001

Protein length: 338 aa.
Product: Cis-prenyltransferase, putative

>YALI0D17556g_CDS-001 MTVLSLPSFPLMQYARNLFQDLLVRVLRTGPVPRHVAFIMDGNRRFAKTNNLELREGHVA
GTELLLKLLEVCFRMGINTVTIYAFSIENFNRPKVETDALFDLIRNNIVVLGSKDEMAER
YGLAIKILGNRDLIPEDILELIVRVEETTKDNKRGTLNICFPYTSRDDIAQAIQKVVTDV
FADTKQAPPPKSFGPPSSTSRPSPLHVTEKMLEKAMYTGESPPLDIMIRTSGVTRLSDFM
LWQSHKNCTLEFVDTLWPDFGVRELYRLLLKWSYVKTLELQRDDLIQTTKVNNSTKNDYV
GNYDEEVSSHASALTKISSVEKAVVHDEGIVEGICID*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG