YALI0D17512g

Overview

Description similar to uniprot|Q6CH08 Yarrowia lipolytica YALI0A14322g, F-box motif containing protein
Locus type CDS
Locus tag YALI0D17512g

Location

Species Yarrowia lipolytica Positions 2152941..2154310
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1370 (nuc.)
Previous locus YALI0D17490g Next locus YALI0D17534g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17512g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17512gYALI0D17512g_mRNA-001YALI0D17512g_CDS-001

Nucleotide sequence

 

>YALI0D17512g
ATGCTACCGCCCGAACTTGTGGATATCCTGTGCGAGCATCTGGACATTGGCTCTCTTGTC
GCTCTCTCGCAAACCAGCACTTCATGGAGAGGGGCTATCAATGATACCGTCTTCAAGACC
CGTTTGACAAGGATATGTCCGTGGTTTGAACCCCACCTGTCACGCCGCTTCTCGTGGAAG
GAGTGTGCTGCAGTTTATGAGACAAGACTCAATGGAGGGAGAATTGCTTCAGCATTGGAA
TTAACCAGCTGTAACAAGTTCTCAGAACCACTAAAGATCCGGTCCGGGGCTGAACAACTT
GACAACAGGAAACTGCTGGAGAACCCAGTGTACACCAGTGAACACGGAATCCAAGTCGAT
CTAGCTGACTATGTCAAGCATTTGAGGAAACGGCCAGATTATGAGCGAGATGACAACTTC
ACAAGAATCATATCGCTACCCGATATGCTCATAGTCGTCTGGTTATCGTCCACCATGTGT
TCATGGGTCAACTTGTGTGACATTCGGGTAAAGATGAGAGGAGACGGAGACGGAGACGGT
GACAAGAATGTCTCCCTCAAAGCTGACTGTAGTCAACAGTTGGAAGTTCATACCATGCCG
TGGTTTCAGGTTCTGGGCACACATGTCTTTCTCGTCACTATTGAGTACTGGAATAGCGAC
AGAGACCCTAGATGGACCTTGTGGTATGTTGATGGAGGAATCAGGAAACTGTTTCAATGT
CCCGGAGAACGTCCTCAATCAGTAGTATGTTATGATGGCTTGTTTCGCTACTTTGAAGAC
AACACATACCATGTGTTTCAGGTGGGGTTAGATGGAACGGAGGTACGAGACTCTACCGAC
TTTTTCCTCACAGCCCTTCACTTTTGGAACGAGCAAGATGAGGTATATCCTCGCAATAAC
TACTCGGTGATCATAGATGAGAATGATAGGCCGTACATTGTTGACTATGATGGGGGGACG
GTGCACAGTGCTAGGAAGGACGGAGATGTTTATTCGAGTCACGTGTGACTGCCCTGAGTG
AAAAATGTCACTCTTCGTGATCCATGAACTAATCTGTTGGCTCCCTCGAACTTGTACAGG
CCTGGTCTCTGAAACACACTCTTGTAAAGTACAAGTAAAAGTACAAGTAAAAGTACCGCA
AAATCCACGGTCACTGTCAGTTGAATTCACTCCGACAATTCCTGACGACTTTCAGATTGG
ACACTCATGGTCTTCTTCTGGACAAGTCCTCCTTTGATATGCAAATCCCATTTTGACATC
ATAATCTCGGAGACGCAAAATTTGAACCCAAGAGAGTCTCCATATCACCAATGCAATCAG
AAGATACAAGCTGACAAAATCAATCTATGTACTCTGAAAATCATTCTATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17512g_CDS-001

Protein length: 336 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D17512g_CDS-001 MLPPELVDILCEHLDIGSLVALSQTSTSWRGAINDTVFKTRLTRICPWFEPHLSRRFSWK
ECAAVYETRLNGGRIASALELTSCNKFSEPLKIRSGAEQLDNRKLLENPVYTSEHGIQVD
LADYVKHLRKRPDYERDDNFTRIISLPDMLIVVWLSSTMCSWVNLCDIRVKMRGDGDGDG
DKNVSLKADCSQQLEVHTMPWFQVLGTHVFLVTIEYWNSDRDPRWTLWYVDGGIRKLFQC
PGERPQSVVCYDGLFRYFEDNTYHVFQVGLDGTEVRDSTDFFLTALHFWNEQDEVYPRNN
YSVIIDENDRPYIVDYDGGTVHSARKDGDVYSSHV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG