YALI0D17204g

Overview

Description highly similar to uniprot|Q01939 Saccharomyces cerevisiae YGL048c SUG1 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0D17204g

Location

Species Yarrowia lipolytica Positions 2119555..2120877
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1323 (nuc.)
Previous locus YALI0D17182g Next locus YALI0D17226g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17204g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17204gYALI0D17204g_mRNA-001YALI0D17204g_CDS-001

Nucleotide sequence

 

>YALI0D17204g
ATGACGACAGTTGCAAGCAACCAGGTGGGTCCCTCTTCCTCGTCAGGCATTGCGCCGTTC
TTTGCGCAACAGATTGAGGACTTTGAGCTGAAAATCAACAAGAAGCTGCAAAACTTGCGA
CGGTTGGAAGCCCAGCGAAACGCCCTCAACACCAAGGTGCGTCTGCTCAAGGACGAGCTC
CACGTGCTGCAGGAGTCGGGCTCGTACGTCGGCGAGGTGATCAAGATCATGGGCAAGCAG
AAGGTGCTGGTCAAGGTCCACCCCGAGGGCAAGTACGTGGTCGATATTGCTCCCGACCTC
GACATTAAGAAGATCACGCCCTCGTTGCGGGTCTGTCTGCGATCGGACTCGTACACTCTG
CACCAGATTCTGCCCAACAAGGTCGATCCTCTGGTGTCGCTGATGATGGTGGAAAAGGTG
CCTGACAGTACCTACGACATGGTGGGAGGTCTGGACCAGCAGATCAAGGAGATCAAGGAG
GTGATCGAGCTGCCCGTCAAGCATCCCGAGCTGTTTGAAAGTCTGGGTATCGCGCAGCCC
AAGGGAGTCATTCTTTACGGACCCCCCGGTACCGGAAAGACCCTTCTTGCACGAGCTGTG
GCGCATCACACCGAGTGTAAGTTCATTCGAGTGTCTGGTTCCGAGCTGGTGCAAAAGTAC
ATTGGAGAGGGTTCTCGAATGGTTCGAGAGCTCTTTATCATGGCCCGAGAGCATGCCCCA
AGTATCATCTTCATGGACGAAATTGATTCCATTGGTTCTGCTCGAACCGAGTCTGGAGGA
GGCGGCGGCGGTGGCGACTCTGAGGTTCAGCGAACCATGCTGGAGCTTCTCAACCAGCTG
GACGGTTTCGAGTCGTCCAAGAACATCAAGATCATCATGGCCACTAACCGTCTTGACATT
CTGGACCCTGCTCTTCTGCGTCCCGGTCGAATCGACCGAAAGATCGAGTTCCCCCCGCCC
ACCGTGGAGGCTCGAGCCGACATTCTGCGAATCCACTCACGACGAATGAACCTAACCCGA
GGAATCGATCTCAAAAAGATTGCCGAGAAGATGAATGGCTGTTCGGGAGCCGAAGTCAAG
GGAGTGTGCACAGAGGCCGGAATGTACGCTCTGAGAGAGCGACGAATCCACGTGACCCAG
GAGGACTTTGAGCTGGCTGTGGCCAAGGTCATGAGCAGAAACGATGCTTCCGAGGTTTCT
GTTGCCAAGCTGTTCAAGTAAGCACTGGTTTGTTGGTGGAAGGGGTTCGTTGGAGTCACT
CTGTAAGCATACTTCTTGGAACATCATGGAGGATATATAGTAATGTCATGTTATGATTAG
AAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17204g_CDS-001

Protein length: 407 aa.
Product: ATPase of the 19S regulatory particle of the 26S proteasome, putative

>YALI0D17204g_CDS-001 MTTVASNQVGPSSSSGIAPFFAQQIEDFELKINKKLQNLRRLEAQRNALNTKVRLLKDEL
HVLQESGSYVGEVIKIMGKQKVLVKVHPEGKYVVDIAPDLDIKKITPSLRVCLRSDSYTL
HQILPNKVDPLVSLMMVEKVPDSTYDMVGGLDQQIKEIKEVIELPVKHPELFESLGIAQP
KGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAP
SIIFMDEIDSIGSARTESGGGGGGGDSEVQRTMLELLNQLDGFESSKNIKIIMATNRLDI
LDPALLRPGRIDRKIEFPPPTVEARADILRIHSRRMNLTRGIDLKKIAEKMNGCSGAEVK
GVCTEAGMYALRERRIHVTQEDFELAVAKVMSRNDASEVSVAKLFK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG