YALI0D17160g

Overview

Description similar to uniprot|P40053 Saccharomyces cerevisiae YER080w
Locus type CDS
Locus tag YALI0D17160g

Location

Species Yarrowia lipolytica Positions 2116227..2118058
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1832 (nuc.)
Previous locus YALI0D17138g Next locus YALI0D17182g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17160g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17160gYALI0D17160g_mRNA-001YALI0D17160g_CDS-001

Nucleotide sequence

 

>YALI0D17160g
ATGCAAAGCTGGAACTCACAGTCCTTTCTCTCCTCACACTTCACCATGCTCCGATACGCT
TGCAAACGAGCCGTGCCGCGCCTGAACGCCGCCTCCGGCCTGAGATTCCAGTCCTCCAAG
CCCGCCGACGGGCCCGAAACCGTCTTCACCTCTCTCAATGAGGAGAATGACCCCAACCGA
GACGCCTTCTTCAAGTACACTTGGGGAACCTGGCTCAAGAACAACGAGGCCGAGCGAGCC
AAGCGAGAGACCCGGTTCTCGATCGAGGGTCTTGCCGAGGTGATCAAGTCGCTCCCCCAG
TCTGGTAAGGCTCCCATTGAGGCCGAGACCGAAATCAAGGTCACCCAGCTGGCTTCGCTA
CACGAGGGCAAGCACCACCGAGTCTACCGAGTTGATGTGGACGACGGCAAGCAGTACGTG
CTGCGAATCCCCTACGGTCTGGGCTCCGAGCTCTTCCGAAAGAAGCGAATCCAGTCCGAG
GTTGCCACCATGGACTTTGTGCGAGAGAAGGTGGCCAACAACAAGTTCATTGTGCCCGAG
GTTTACAGCTGGAACGCTACTGTCGACAACCCTCTCGACACTCAGTACACCCTGATGGAC
TACTTTGCTGGCCGAGACACTCTGATGAAGCACTGGAACCCCGTGGCTCAGGAGATGACC
GAGCGAGCCGCCAAGATCAAGCCCGTTGTTGATATCTACTCTGCGCTGCTGCAGCCCGAA
TTCACCCGGTACGGATCCCTGTACTTCACCGAGGACGTGTCTTCCAAGGACGCTTCTGTT
CTGGCCTACAAGGGTGCTGAGAACGACAAGAAGGAGCTTGCTGACCGATGGAGAATTGGA
CCCACCACCGAGTCTCGATTCTGGAAGAACTCCTTGCCCGAGGACTCGCCCCTGCGAGGC
CCCTGGGAGACTGCCGAGGAGTACATTGAGGCCACTGCTGCCATCAACCTGCACAACCTG
GCTGAGCTTGCCAAGAACGGCGACCGAAACCCCGCCGTGGTTGCTGCTGCCACCGCCACT
TACGAGAAGTACCAGCAGCTTGCCTCCCAGCTTCTCCTGCGACCCGAGGTTGAGAATGAC
AACCTGTTTTCTGCCCGAATGGGCTTTGGTGACCTGCACCCTATCAACGTGCTTGTTGAA
GGCCAGAAGGATATTGCCGAGTCTTCTCTTGCTCTGGTCGACTTTGAGAACACTTCCATT
AAGCCCGCTCTGTTGATCGGAACTCCCGACTATGTGCGATACGGAGGCCTCAAGCTGTTC
AAGACCGAGGACATTCCCAACTACGACCAGCTCAGCGACCAGGAGAAGGCACAGGTCAAC
TACATGATTGCCCAGACCCAGAACGCCTTCACTTTTGAGTTCCTGCTCAACAACGAGGCT
CCTGAGTTCATCAACTCCTTCTCTCCTCGAGTCAAGCGGCTGTCAGAGCCTGTTAGACTC
GCCCTCAACCCTCTGTATCTCGAGGACCACCTTGATCTGTCGGAGGAGATGATCAAGCTG
CAGCAGGATTGGACCCCCATCATGGGTATGGAGCGAGAGTTCCCTGTCCACTGGACCAAC
GAGGAGTATGAGAAGCAGGCCAAGGACTTTGCCGAGTGGAACCAGAAGGCCATGTCCACT
CCCTTCTTCCAGACCAAGGGCTGGGTTCCTCAGGACATGTTTGAGCAGCTGTTTGGAAAC
GGTCTGCTGGACAAGACCGAGAGCGGAGACTATGTCTACGTTCCTCCCAAAAAGGAGTAA
TGGTTTAGTCCAACTTCAATGTCCAATAGTATATAGTAAATAGTCAATGAGATCAATGAG
TCTAGCAATGGCAGGGACCTTATCTATCAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17160g_CDS-001

Protein length: 580 aa.
Product: Conserved hypothetical protein

>YALI0D17160g_CDS-001 MQSWNSQSFLSSHFTMLRYACKRAVPRLNAASGLRFQSSKPADGPETVFTSLNEENDPNR
DAFFKYTWGTWLKNNEAERAKRETRFSIEGLAEVIKSLPQSGKAPIEAETEIKVTQLASL
HEGKHHRVYRVDVDDGKQYVLRIPYGLGSELFRKKRIQSEVATMDFVREKVANNKFIVPE
VYSWNATVDNPLDTQYTLMDYFAGRDTLMKHWNPVAQEMTERAAKIKPVVDIYSALLQPE
FTRYGSLYFTEDVSSKDASVLAYKGAENDKKELADRWRIGPTTESRFWKNSLPEDSPLRG
PWETAEEYIEATAAINLHNLAELAKNGDRNPAVVAAATATYEKYQQLASQLLLRPEVEND
NLFSARMGFGDLHPINVLVEGQKDIAESSLALVDFENTSIKPALLIGTPDYVRYGGLKLF
KTEDIPNYDQLSDQEKAQVNYMIAQTQNAFTFEFLLNNEAPEFINSFSPRVKRLSEPVRL
ALNPLYLEDHLDLSEEMIKLQQDWTPIMGMEREFPVHWTNEEYEKQAKDFAEWNQKAMST
PFFQTKGWVPQDMFEQLFGNGLLDKTESGDYVYVPPKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG