YALI0D17094g

Overview

Description weakly similar to uniprot|G3BB98 Candida tenuis hypothetical protein CANTEDRAFT_94417
Locus type CDS
Locus tag YALI0D17094g

Location

Species Yarrowia lipolytica Positions 2108603..2110069
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1467 (nuc.)
Previous locus YALI0D17086g Next locus YALI0D17116g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17094g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17094gYALI0D17094g_mRNA-001YALI0D17094g_CDS-001

Nucleotide sequence

 

>YALI0D17094g
ATGCAAGTGAGTACAGGAGCCTGGAGGCCGTTGAACAACAGTGGTTGCCATTGAGTGGTT
GGACGGCGGTTTCTGACCGGTATCGACTGGATCATACCCAAGAAGGCGAGATGAGATGAG
ATGAGATGAGGGTTGGCCGACATTATTCAACCATTGCATGTTATCCGACACTATCCAACC
ATGACATGTTACCTGTTCATTCTTGAATGAGCTACTCACTCGGGCGAATGAATCCGGTTC
ACGTCATGTCTCTTGGTGATTGATGCTATGCTACTACGTCAGAGTGTCATGATAGTGATG
TCTCGCATGTCCAGACGTTGATTCCACTCTGCGGTGACGACCACGAACACGGGTTTTAAC
AGCTTCTGCTTTGCTGATCTTGAAAGACCGTCTTTTTAGTGCCATTTATGTTGTTGTGTG
GACTTGTTCCATAACATATCACCGAAATGATCTGGTTGTGCTCTCAGATTACAATTGCGT
GACTTGGGATAACAGATCCATGACCTCACTTCCTGTTCCTTTCATTCATTTCTAACCCAG
CTCAAACCATGGCTCCAAGTCAACTCTCCCCGACACATTATCGAGGAGGGACATGAAGAA
GGATTTGAAGACGGCCAGGAAGCGTCGCCCTACACGAAATCCGTGCTCTTCGCCAACTCT
CTCACTCATCCAACCTCGCCACAGACTCTTCTCGTGTCCACAGCAAAACTCTTTCCTGTA
GTGGAAGCTCTTTTCACTCAGAAATCGAAACCCATCAATCTCGGCGAGATTGTCGGCGAG
ATTCAGCTCAAAAAGAATGCCCAGAGCGCAGAAAACAGACGCAAGTTTACCACCGACTTT
TTGGAGGAGGAAGACGAGGAGGACGAGCTGGAGGATGTCACTAAAGAGCTGATCACCTCC
CACAAGGTAATCCTATCGCCAGTTCAGTATGGAGATGTGGTTCTAGTGGAAATCAAGCAG
GATGAGCTTCTTCTGGCACATGGGTTTGCTCAACAGTTGGTTGATCTAATCAAACCCTGC
CAAGCGCTCATTCTTGCACCTGGTAACACCATTGCTGACGTTCATGTGCACCAGCTGGAT
GTGGGTAAGTCGAATCTCGTCCCCCTGGCTTCCACACCTCTGCTGCAGTCTCCAAACTTC
ATATCTGGACTAGGAGCCGCCGTTCTCACCCGATGTCAGCAGTCACAGGTGCCTGCCACA
GCACTAGTGGTCCAGAATGTGGGCACTCAGTCGTTCGAGCGATACCAGAGTGACACGTTC
GAGGACCTGACTGGAATTCTCGCCGGAGTTTTCGGGCTCGACGCAGCAAAGGCGTTGAAG
GAGTTGAGAGCAGATGATGGCGTTGCTGGACTGTACCTGTAGGAGGTCATGACTGCGTTG
CAGAGGCGGTTTCGATGCGTCCACAACACAATTAGTATATTTGTCTTAGTATTGTACCTG
ATAAGGGCTCAGTGAACTTGTATGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17094g_CDS-001

Protein length: 276 aa.
Product: Conserved hypothetical protein

>YALI0D17094g_CDS-001 MQLKPWLQVNSPRHIIEEGHEEGFEDGQEASPYTKSVLFANSLTHPTSPQTLLVSTAKLF
PVVEALFTQKSKPINLGEIVGEIQLKKNAQSAENRRKFTTDFLEEEDEEDELEDVTKELI
TSHKVILSPVQYGDVVLVEIKQDELLLAHGFAQQLVDLIKPCQALILAPGNTIADVHVHQ
LDVGKSNLVPLASTPLLQSPNFISGLGAAVLTRCQQSQVPATALVVQNVGTQSFERYQSD
TFEDLTGILAGVFGLDAAKALKELRADDGVAGLYL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG