YALI0D17072g

Overview

Description similar to uniprot|Q06549 Saccharomyces cerevisiae YLR245c CDD1 cytidine deaminase
Locus type CDS
Locus tag YALI0D17072g

Location

Species Yarrowia lipolytica Positions 2106543..2107372
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 830 (nuc.)
Previous locus YALI0D17050g Next locus YALI0D17086g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17072g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17072gYALI0D17072g_mRNA-001YALI0D17072g_CDS-001

Nucleotide sequence

 

>YALI0D17072g
ATGTCAATCACCAAATCCGAACTCGAAAACCTGCGGGACAAGTCGCTCAGCGCACGTGAC
TTCTCTTACTCGCCCTACTCAAAGTTCCGAGTCGGAGCTGTGCTGCTGACCGAGTCTGGA
GAATGGATCCAGGGCGCCAATGTGGAGAACGCCAGTTACGGAGGTGCTATTTGCGCCGAA
AGAGTGGCCATCACCAGGGCTATTGTGAGTACACCACACAGAGGATGCAGTGTCAGCATG
GGCACGGGGAGATCAAGTGATGGTGCCTACTTGCCTACTAACACAGATGGAGGGACACAA
GAAGTTCAAGGCTATTGGAGTGGCTTCGGACCTTTCTGTGGTCTGCTCCCCATGCGGTAT
TTGTCGACAGTTGTGAGTATAAACCTGTCTTGTCTTAGGAGCCGTGTTTTAGTCTGACGT
TCGAAATCGCACCAGAGCCTACAGCTACGCCTTCAGTGGTTGTCCGTACTAACGCAGCAT
CAGAGAATGGTCTACCGACATTCCCATCTATCTCTTCACCAAGGTGAGTATACACTGTCA
TCATTCTATCAATTGATTGCTAACCCAGGACGGAAAGTACACGATGCAAACCATCAAGGA
GCTGCTGCCTCTGAGCTTTGGCCCCGAGCATCTCGATACTGAAAAGGTCGAAGCCGAAAC
CGAGACGCTATTGGAGGTCTAGACTTGCACCACGTCTGACTATGACGGGGGAGCCTGGAG
CTTGGCTCGCAGGGCCAGGAGCTGTGTTAGTAAGTAAGCAGGACGGGCAAACGCCGACAC
GCCACTTCCTGGCATTTAGTGCATATGTAAATAACAGAAAACATGAAGTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D17072g_CDS-001

Protein length: 150 aa.
Product: Cytidine deaminase, putative

>YALI0D17072g_CDS-001 MSITKSELENLRDKSLSARDFSYSPYSKFRVGAVLLTESGEWIQGANVENASYGGAICAE
RVAITRAIMEGHKKFKAIGVASDLSVVCSPCGICRQFIREWSTDIPIYLFTKDGKYTMQT
IKELLPLSFGPEHLDTEKVEAETETLLEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG