YALI0D16720g

Overview

Description similar to uniprot|P17505 Saccharomyces cerevisiae YKL085w Malate dehydrogenase, mitochondrial precursor
Locus type CDS
Locus tag YALI0D16720g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 2069481..2070323
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 843 (nuc.)
Previous locus YALI0D16709g Next locus YALI0D16753g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16720g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16720gYALI0D16720g_mRNA-001YALI0D16720g_CDS-001

Nucleotide sequence

 

>YALI0D16720g
GCCCTCAAGGGCGCCAAGCTGGTGCTGATCCCCGCCGGTGTCCCCCGAAAGCCCGGCATG
ACCCGAGACGATCTGTTCAACACCAACGCCTCCATTGTGCGAGACNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGGTGGGTCCCCGTCAACTCCACCCCC
CCCACTGTCCCCCAGGTGCCCAACTCCAAGGGCAAGTACACACCCCAAGAAGCTCATTCG
GATGTCACCACCCTCGACAGTCATCCGAGCCGAGCGATTCGTCTCCCAGCTCAGAGCACA
CCAACCCCACCAAGGAGTACTTCCCCGTTGTTGGCGGCCACTCCGGTGTCACCATTGTCC
CCCTCGTGTCCCAGTCCGACCACCCCGACATTGCCGGTGAGGCTCGAGACAAGCTTGTCC
ACCGAATCCAGTTTGGCGGTGACGAGGTTGTCAAGGCCAAGGACGGTGCCGGATCCGCCA
CCCTTTCCATGGCCCAGGCTGCCGCCCGATTCGCCGACTCTCTCCTCCGAGGTGTCAACG
GCGAGAAGGACGTTGTTGAGCCCACTTTCGTCGACTCTCCTCTGTTCAAGGGTGAGGGCA
TCGACTTCTTCTCCACCAAGGTCACTCTTGGCCCTAACGGTGTTGAGGAGATCCACCCCA
TCGGAAAGGTCAACGAGTACGAGGAGAAGCTCATCGAGGCTGCCAAGGCCGATCTCAAGA
AGAACATTGAGAAGGGTGTCAACTTTGTCAAGCAGAACCCTTAAGGGACTGATGATGTAA
TGATTATATGACATGAGATAAGCGAGCTAGTACCGTAGTTGTAGGTATGTACGAGTATAG
TGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16720g_CDS-001

Protein length: 239 aa.
Product: Mitochondrial malate dehydrogenase, putative

>YALI0D16720g_CDS-001 ALKGAKLVLIPAGVPRKPGMTRDDLFNTNASIVRDFWWVPVNSTPPTVPQVPNSKGKYTP
QEAHSDVTTLDSHPSRAIRLPAQSTNPTKEYFPVVGGHSGVTIVPLVSQSDHPDIAGEAR
DKLVHRIQFGGDEVVKAKDGAGSATLSMAQAAARFADSLLRGVNGEKDVVEPTFVDSPLF
KGEGIDFFSTKVTLGPNGVEEIHPIGKVNEYEEKLIEAAKADLKKNIEKGVNFVKQNP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG