YALI0D16687g

Overview

Description weakly similar to uniprot|Q9FY91 Arabidopsis thaliana SIR2-family protein
Locus type CDS
Locus tag YALI0D16687g

Location

Species Yarrowia lipolytica Positions 2065135..2067067
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1933 (nuc.)
Previous locus YALI0D16676r Next locus YALI0D16709g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16687g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16687gYALI0D16687g_mRNA-001YALI0D16687g_CDS-001

Nucleotide sequence

 

>YALI0D16687g
ATGAACATCGCGACATTGGAGCTAGTCTCATCCATAATGAAGCTGAGAATACCAAAGTTC
GAAAACACGCCGTACACGCCGACACACACGGACGTGGCCTCCGCCGCCAAGGCCCTGTCG
CGCTTCCTGACGGCAAAAAACACAAAAACGGCAATTCTAACCGGCGCAGGCATCTCTACA
GCATCAGGCCTTCCAGACTACAGAGGACCCACAGGAACATACACAACCAACCCAAACCAC
CAGCCGACGCTGTATCACGAGTTTGTGTCTGACGAGCACAAACGCAAGCGGTACTGGTCA
CGTGCGTGGATCGGCTACGAGCAGGCGTTGAAGTGGGCCCGTCCAAACGTGGCTCATGAG
GTGTTGACAGGCTGGCTTAGGGGCGGCCACATCTCGGGCCTCATTACCCAGAACGTGGAC
GGCTTACACAAGCTGAGCCAGGTGAGTGGCGGTGACATTGTGGACAATGTGAACGTGTCG
GCTGATCTGAGAGCTGGTCGAGAGGTTCCGGCACTTGTGGAACTGCACGGATCGGCCTAT
AGAGTGCATTGTCTGAGTTGTGGAGACCAGACATCACGAGAGGATTTCCAAGACAGAATG
GCTAAGGACAATGGATGGAGTAAAGACGATGCTGTGGCCGGGACTGCCATGACTGGGAGA
GGATTTACCACGGACAAGACTACCGAGAGTGATCTGGCACAGTTTGTAGATCCGGGAACG
AGGGTGGAAACAAACACGGGTGCCACAGTCACTCCTGGGGGTTCTCCGACTTCTTCCAAT
CCATTTCTCGCATCTCTAGACGACTCGACTAGCAAATCTCGGCTTGATATTTCTGGAAAC
AAGCTGAATGAAGCTGCTCCTGGTAGACAACAGCAACTCAACGCGGATGGAGACGCGGAA
TTGGACGTGGAAATCGACTACGACAGGGTCGCCATTCCGCCATGTCTCAACTGTGGCGGG
GTTTTGAAGCCCTCCATTGTGTTTTTTGGAGAAAGTGTGCCTGAGGCGGATCGGGCTCGC
GCACGTGATCTGCTGGAGTCGTCCGACCAGCTGCTGGTTATTGGCACGTCTCTGTCCACT
TTCTCAGCCTTTGATCTTGTCCGACAGTTCTACAAACAAGGCAAAAAGGTGGCGGTGTTG
AACAAGGGAGGTGTCCGAGGCGAAGGCAAGGACTGGGAGGCAGATGTGCGACTCGACGGG
GATATCGGAGGGGTTTTGGAGAAGGTCAAAATGTGATTGTTGTGGAGGGGCTTACAGCAT
TATAGAACGATACATTGCGTGGTTGGGGTTTTAGGTGATGAGAGAGCAGTGAGCACTTGC
AGCCATCACACAGGAAGACACCACTAGCCAGCGCCAAGATTCATGTCCCCAGAGCAGATG
ATACTTTACACTGGTGTCTAATCTTTGCAGGGATATGCTACTGGTACAAAGCGCCAGCAT
TCAGTTGACTGACGTTCTCAATCAGTAAAATCTTTCGCACTACTGCACATACGATACCAT
TGATTTACGCCCGTGCTCAGCAGTTCCCCCCCAAAAGGCGCACTTTTAGCACAGTCACCA
CTTCCCCAAACGCTTCACAAGATCCAAACGCCCCCACTACAGTACAGTAGATCCAAACAC
CACTAGACACTTGACCTACAGTACGGTTTGGGGAACTTGAGGAGATGACGTTGTGTGAGC
ACATTTTTGGAGCAGTGCAGCCACTTCAGAGAGCTGGAATTGCTACTGGACTACACGAGC
GGCCTTTTCAGACGCCTGTCAAAAAAGAAACCCCTCCGATATATGAAAAAATGCAGCTTT
AGAAGCACAGTTACAACGTGCGGTAGTGCGTATGTAGATGTAGCAGTCACAATTTTTGGG
TTAAAATTTCGCCTGCGGATGCCCTTCCTAACATTATTAGTTTTTGTTAAAAAATAAATT
ATTTTCTCTTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16687g_CDS-001

Protein length: 412 aa.
Product: Conserved hypothetical protein

>YALI0D16687g_CDS-001 MNIATLELVSSIMKLRIPKFENTPYTPTHTDVASAAKALSRFLTAKNTKTAILTGAGIST
ASGLPDYRGPTGTYTTNPNHQPTLYHEFVSDEHKRKRYWSRAWIGYEQALKWARPNVAHE
VLTGWLRGGHISGLITQNVDGLHKLSQVSGGDIVDNVNVSADLRAGREVPALVELHGSAY
RVHCLSCGDQTSREDFQDRMAKDNGWSKDDAVAGTAMTGRGFTTDKTTESDLAQFVDPGT
RVETNTGATVTPGGSPTSSNPFLASLDDSTSKSRLDISGNKLNEAAPGRQQQLNADGDAE
LDVEIDYDRVAIPPCLNCGGVLKPSIVFFGESVPEADRARARDLLESSDQLLVIGTSLST
FSAFDLVRQFYKQGKKVAVLNKGGVRGEGKDWEADVRLDGDIGGVLEKVKM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG